| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4575 |
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| Symbol | |
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| ID | 5872383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5114322 |
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| End bp | 5115773 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641549708 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001670797 |
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| Protein GI | 167035566 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGG CATTTCGCTT GAGCCCTTTA TTGCTGGCCG TACTGATGGC AGGCTGCACC
ATGGGCCCGG ACTTTCGGCG CCCCGACAGC CAGGCACCGC AACAGTGGGC GCCGCTGCAG
GGTGAGGCAG CGGCCAGCCA GCCGCAGGCC GAACCGCTGG AGTTGCGCTG GTGGGAATCC
TTTCACGATG CCCAGCTCAG TGCCTTGATC CAGCGCGTCG CCGAACGCAA CCTCGACCTG
CAGATGGCCA GCGCACGGTT GCTGCAAAGC CGTGCCCTGC GCAGCACCGT GGCCGCCGAC
GAAATGCCGT CGGTGGACGC CAACGCCGGC TACAGCCGCG CGCGTAACAG CGCCGAAGGC
CTCAGCGACC CGTCCGGCAA AGCGGGTAAA GCGGCGTACA ACCTCTGGCA AGGCGACCTG
GTGGCAGGTT GGGAGTTGGA CCTTTGGGGC CGCGTACGAC GCCAGGTCGA GGCTGCCGAT
GCCAGCGTCG AAGTGGCTGA GAACGACCGC CGTGGGGTGC TGCTTGCCCT GCTGTCGGAA
ACCGCCGGCA ACTACATCCA GCTGCGCGCG GTGCAGCACA CCCTGGATGT GACGCAGGAC
AACCTCAAGG TTGCCCGGCA CAGCCTGAAG CTGTCCGAAG ACCGCCAGGC CGAAGGCGTT
GCCACGCGCC TGGATGTGGC CCAGGCCAGC GCTCAGGTCG CGTCGATCGA GTCGCGACTG
CCCAGCCTGG AAGCCCGCCG TGATGACCTG ATCAACGCCC TCAGCCTGCT CGCTGCCGAA
CCGCCACGCA GTTTGCAGGC CGAATTGCTG CAGGGCGGCG AGCTGCCCGC GCCGCAGCAG
AAGTTTGCCA TTGGCTTGCC GTCCGAACTG GCCGAGCGCC GCCCGGACAT CCGCCAGGCC
GAGGCCCGCC TGCATGCCGC CACCGCCAGC ATCGGTGTGG CCAAGGCAGA TTTCTACCCG
AGCATCCGGC TGTCGGGCAG TGTCGGTTTC CAGGCCATGC AGCTGTCTGA TTTTGGTGGC
TGGGATTCGC GTCGGTTTGC TTTCGGGCCT CAGCTGTCGC TGCCGATCTT CGAGGGTGGC
CGGCTCAAGG GCACCCTGGA ACTGCGCGAG GCGCAGCAGC AAGAGGCCGC GCTGAACTAC
CGCAAGGTGG TGCTGGGGGC CTGGCATGAA ATTGACGATG TGCTACGCCT GTACAACGCC
AGCCAGTTGC GCCGCGACCA TTTGGCCGAG GCCGTGCGGC AGAACCGCAT CGCCCTGGAA
ACCGCCCAGC GCCAGTATGT GGAAGGGGCG GTGGACTTTC TCAATGTGCT GACAGTGCAA
GGGGCATTGC TGGCCAGCGA GGAGCAGTGG ATCGACAGCT CGGCAGCGGT GTCGCAGGCG
CTGGTGGGGT TGTACAAGGC CTTGGGGGGT GGCTGGCAGG CGTTTGATGA GCAGCCAGCG
AACAAAGCCT AG
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| Protein sequence | MKSAFRLSPL LLAVLMAGCT MGPDFRRPDS QAPQQWAPLQ GEAAASQPQA EPLELRWWES
FHDAQLSALI QRVAERNLDL QMASARLLQS RALRSTVAAD EMPSVDANAG YSRARNSAEG
LSDPSGKAGK AAYNLWQGDL VAGWELDLWG RVRRQVEAAD ASVEVAENDR RGVLLALLSE
TAGNYIQLRA VQHTLDVTQD NLKVARHSLK LSEDRQAEGV ATRLDVAQAS AQVASIESRL
PSLEARRDDL INALSLLAAE PPRSLQAELL QGGELPAPQQ KFAIGLPSEL AERRPDIRQA
EARLHAATAS IGVAKADFYP SIRLSGSVGF QAMQLSDFGG WDSRRFAFGP QLSLPIFEGG
RLKGTLELRE AQQQEAALNY RKVVLGAWHE IDDVLRLYNA SQLRRDHLAE AVRQNRIALE
TAQRQYVEGA VDFLNVLTVQ GALLASEEQW IDSSAAVSQA LVGLYKALGG GWQAFDEQPA
NKA
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