Gene PputGB1_4560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4560 
Symbol 
ID5872368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5095024 
End bp5095803 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content61% 
IMG OID641549693 
Producthypothetical protein 
Protein accessionYP_001670782 
Protein GI167035551 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGG TGATTTCCCC CGCCAAGACC CTCGACTACG ACACCCCGCC AGTAACCGAG 
CGTTTCACCC TGCCCCAGTA CCTGGATGAC TCCCAGGCGC TGATCCAGCA GCTGCGCGAA
CTGTCGCCAG CGCAGATCAG CGAACTGATG CACCTGTCCG ACAAGCTCGC GGGCCTGAAT
GCCGCTCGTT TCGGCAGCTG GACCCCAGAC TTCACCCCCG CCAATGCCAA ACAGGCGCTG
CTGGCGTTCA AGGGTGACGT GTACACCGGC CTCGACGCCG AAAGCCTGGC TGAAGACGAC
TTCAGTTACG CACAAGACCA CCTGCGCATG CTTTCTGGCC TGTACGGCCT GCTGCGCCCG
CTGGACCTGA TGCAGCCCTA CCGCCTGGAA ATGGGCACCA AGCTGGCCAA CGCACGCGGC
AAGGACCTGT ACGCCTTCTG GGGCACACGC ATCAGCGAAT GGCTGAACGA GGCCCTGGCC
GAACAGGGTG ATGACGTGCT GCTGAACCTG GCCAGCAATG AGTACTTCAG CGCGGTGAAA
CGCAGCGCGC TGAAGGCCCG GGTGATCAAT GTCGATTTCA AGGACCTGAA GAACGGCCAG
TACAAGATCA TCAGCTTCTA CGCCAAGAAA GCCCGCGGCA TGATGAGCCG CTTCGTCATC
CAGCAGCGCA TCAGCGACCC AGAGCAGCTC AAGCAGTTCG ATGTGCAGGG CTATTACTAC
AGTGCCGAGC AGTCCAAGCC GGACCATCTG GTGTTCCTGC GCGATCACCC TGCCGATTAA
 
Protein sequence
MLTVISPAKT LDYDTPPVTE RFTLPQYLDD SQALIQQLRE LSPAQISELM HLSDKLAGLN 
AARFGSWTPD FTPANAKQAL LAFKGDVYTG LDAESLAEDD FSYAQDHLRM LSGLYGLLRP
LDLMQPYRLE MGTKLANARG KDLYAFWGTR ISEWLNEALA EQGDDVLLNL ASNEYFSAVK
RSALKARVIN VDFKDLKNGQ YKIISFYAKK ARGMMSRFVI QQRISDPEQL KQFDVQGYYY
SAEQSKPDHL VFLRDHPAD