| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4554 |
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| Symbol | |
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| ID | 5872362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5089179 |
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| End bp | 5090648 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549687 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_001670776 |
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| Protein GI | 167035545 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCAAGG CACTCAAGAA AATATTCGGC AAGGGAGACG CCGCGCCACA GGCCGTCGCT
CCTGCTGCCA GCGTGACGCC ACCGGCGCCC ACGCCCGCCA GCGAGCCCCG GCCCGCAGCC
AAACCGGCCG CCCCGCGCGC CAACCCCACC CCCAAGGCTG AGCGGCCTGC CGCCGTTACG
CCAGCGCCAG CAGCCGAGAA GCCGGCCAAG GACAAACCGC GTCGCGAGCG CAAGCCCAAA
CCGCAGGCCA GCCTATGGAA GCCCGAAGAC TTCGTGGTCG AGCCGCAGGA AGGCAAAACC
CGTTTCCACG ACTTCAAGCT GTCCAACGAG CTGATGCACG CCATCCACGA CCTGGGCTTC
CCATACTGCA CGCCGATTCA GGCGCAGGTA CTGGGTTACA CCCTGCGTGG CCAGGACGCC
ATCGGCCGGG CCCAGACCGG TACCGGCAAG ACCGCCGCAT TCCTGATCTC GATCATTTCC
CAGTTGCAGC AAACGCCCCC GCCCAAGGAA CGCTACATGG GCGAACCGCG CGCGCTGATC
ATCGCCCCTA CCCGCGAGCT GGTGGTGCAG ATCGCCAAGG ACGCCGCGGC CCTGACCAAG
TACACCGGCC TGAACGTGAT GAGCTTCGTC GGTGGCATGG ACTTCGACAA GCAGCTCAAG
GCCCTGGAAG CGCGCCACTG CGATATCCTG GTGGCCACCC CGGGCCGCCT GCTGGACTTC
AATCAGCGCG GCGAGGTGCA CCTGGACATG GTCGAGGTGA TGGTGCTGGA CGAAGCCGAC
CGCATGCTCG ACATGGGCTT CATCCCCCAG GTTCGCCAGA TCATTCGCCA GACGCCGCCG
AAGAGCGAGC GCCAGACCCT GCTGTTCTCC GCCACCTTCA CCGACGACGT GATGAACCTG
GCCAAGCAGT GGACCACCAA CCCGGCCATC GTCGAGATCG AACCGGAAAA CGTCGCCAGC
GAAACGGTCG AGCAGCATGT GTATGCCGTG GCCGGCAGCG ACAAGTACAA GCTGCTGTAC
AACCTGGTGA CCCAGAACAA GTGGGAACGG GTAATGGTGT TCGCCAACCG CAAGGACGAA
GTGCGGCGTA TCGAAGAAAA GCTGGTGCGT GACGGCATCA ATGCCGCCCA GCTGTCGGGC
GACGTGCCGC AACACAAGCG CATCCGTACC CTGGAGAGCT TCCGTGAAGG GCGCATCACC
GTGCTGGTGG CGACCGACGT GGCGGGGCGT GGTATTCACA TCGATGGTAT CAGCCATGTG
ATCAACTTCA CCCTGCCGGA AGACCCGGAC GACTACGTGC ACCGCATTGG CCGAACTGGC
CGTGCGGGGA GCAGTGGTGT GTCGATCAGC TTTGCCGGTG AGGATGATTC CTACCAGTTG
CCGGCGATCG AAGAACTGCT GGGGCGCAAG ATCAAGTGTG AAATGCCGCC GGATGAGCTG
TTGAAGCCGG TGCCGCGCAA GCACCACTGA
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| Protein sequence | MLKALKKIFG KGDAAPQAVA PAASVTPPAP TPASEPRPAA KPAAPRANPT PKAERPAAVT
PAPAAEKPAK DKPRRERKPK PQASLWKPED FVVEPQEGKT RFHDFKLSNE LMHAIHDLGF
PYCTPIQAQV LGYTLRGQDA IGRAQTGTGK TAAFLISIIS QLQQTPPPKE RYMGEPRALI
IAPTRELVVQ IAKDAAALTK YTGLNVMSFV GGMDFDKQLK ALEARHCDIL VATPGRLLDF
NQRGEVHLDM VEVMVLDEAD RMLDMGFIPQ VRQIIRQTPP KSERQTLLFS ATFTDDVMNL
AKQWTTNPAI VEIEPENVAS ETVEQHVYAV AGSDKYKLLY NLVTQNKWER VMVFANRKDE
VRRIEEKLVR DGINAAQLSG DVPQHKRIRT LESFREGRIT VLVATDVAGR GIHIDGISHV
INFTLPEDPD DYVHRIGRTG RAGSSGVSIS FAGEDDSYQL PAIEELLGRK IKCEMPPDEL
LKPVPRKHH
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