| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4552 |
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| Symbol | |
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| ID | 5872360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5087060 |
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| End bp | 5088088 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549685 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001670774 |
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| Protein GI | 167035543 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGT TGAAAACCAC CCTGGCAGTC CTGACCGCTG CCGCCGCGCT GGGCGCCGTG
AGCAATGCCC AGGCCGGCGC CACCCTCGAT GCGGTAAAGA AAAAGGGCTT CGTCCAGTGT
GGCGTGAGCG ACGGTCTTCC AGGCTTCTCG GTACCTGATG CACAGGGCAA GATCGTCGGT
ATCGACGCCG ATGTCTGCCG TGCCGTGGCC GCCGCCGTGT TTGGCGATGC CACCAAGGTC
AAGTTCAGCC AGCTCAACGC CAAGGAACGC TTCACCGCCC TGCAATCGGG CGAAGTCGAC
GTGCTGTCGC GCAACACCAC CTGGACCAGC TCGCGCGATG CGGGCATGGG CCTGGTGTTC
GCCGGTGTCA CCTACTATGA CGGCGTCGGC TTCCTGGTCA ACAAGAAGCT GGGTGTTTCC
AGCGCCAAGG AGCTCGATGG CGCGACCATC TGCATCCAGG CCGGTACCAC CACCGAGCTG
AACGTATCGG ACTTCTTCCG CGCCAATAAC CTGAAGTACA CCCCGATCAC CTTCGACACG
TCCGACGAAA GCGCCAAGTC GCTGGAGTCC GGCCGTTGCG ACGTGCTGAC TTCGGACAAG
TCGCAGCTGT TCGCCCAGCG CTCCAAGCTG GCCGCGCCGA CCGACTACGT GGTGCTGCCG
GAAACCATCT CCAAGGAGCC ACTGGGCCCG GTAGTGCGCA AGGGCGACGA GGAGTGGTTC
AGCATCGTCA AATGGACCCT GTTCGCCATG CTCAACGCCG AAGAGGCGGG CATCACCTCG
AAGAACGTCG AAGCTGAGGC CAAGGCCACC AAGAACCCGG ACGTCGCCCG CCTGCTGGGT
GGGGATGGCG AGTACGGCAA GGACCTCAAA CTGCCCAAAG ACTGGGTAGT GCAGATCGTC
AAGCAAGTCG GCAACTACGG CGAAGTGTTC GAGAAGAACC TGGGCCAGAG CACCGACCTG
AAGATCGACC GTGGCATGAA CGCCCTGTGG AACAACGGCG GCATCCAGTA CGCGCCACCT
GTGCGCTGA
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| Protein sequence | MKMLKTTLAV LTAAAALGAV SNAQAGATLD AVKKKGFVQC GVSDGLPGFS VPDAQGKIVG
IDADVCRAVA AAVFGDATKV KFSQLNAKER FTALQSGEVD VLSRNTTWTS SRDAGMGLVF
AGVTYYDGVG FLVNKKLGVS SAKELDGATI CIQAGTTTEL NVSDFFRANN LKYTPITFDT
SDESAKSLES GRCDVLTSDK SQLFAQRSKL AAPTDYVVLP ETISKEPLGP VVRKGDEEWF
SIVKWTLFAM LNAEEAGITS KNVEAEAKAT KNPDVARLLG GDGEYGKDLK LPKDWVVQIV
KQVGNYGEVF EKNLGQSTDL KIDRGMNALW NNGGIQYAPP VR
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