| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4551 |
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| Symbol | |
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| ID | 5872359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5085814 |
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| End bp | 5086992 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641549684 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001670773 |
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| Protein GI | 167035542 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATC AAATCGGCGC ACCCAAGGGC TTGTCCCTTA ACGATCCGCG TGTGCGCGCG
TGGCTGTTCC AGATTCTCAC GATCGTCTTC GTGGTCGGTC TGGGCTGGTA CCTGTTCCAC
AACACGCAAA CCAACCTGCA GCACCGAGGC ATCACGTCGG GCTTCGACTT TCTGGACCGC
AGTGCCGGCT TCGGCATCGC CCAGCACCTG ATCCCCTACG TGGAATCCGA CAGCTATGCG
CGGGTGTTCG TCATCGGCCT GCTCAATACC CTGCTGGTGA CCTTCATCGG TGTCATCCTG
GCGACGATCC TGGGCTTCAT CATCGGTGTG GCGCGGCTGT CGCCAAACTG GATGATCAAC
AAGCTGGCGA CCGTGTATGT GGAAACCTTC CGCAATATCC CGCCGCTGTT GCAGATCCTG
TTCTGGTATT TCGCCGTGTT CCTGACCCTG CCAGGCCCAC GGGGCAGCAT CAACATCGAC
GATATGTTCT TCATCAGCAA CCGTGGCCTG AACATGCCGG GCGCCTCCAT GGCCGATGGT
TTCTGGCCGT TTGCAGTGGC CGTGGTGGTG GCAATCGCGG CCATTGCCGT GATGGTGCGC
ATGGCCAACA AACGCTTTGA CGAGACTGGC GTGCCGTTCC ACAAGTTCTG GGCAGGGCTG
GCGCTGTTGA TCGCCATCCC GGGCTTGAGC GTGCTGTTGT TCGGCAGCCC GGTGACCTGG
GAAGTACCGC AGCTGAAGGG CTTCAACTTC GTCGGTGGCT GGGTATTGAT CCCCGAACTG
CTGGCGCTGA CCTTGGCGCT GACTATTTAT ACGGCAGCTT TCATCGCTGA AATCGTGCGT
TCCGGCATCC GTTCGGTCAG CCATGGCCAG ACCGAAGCCG CCCGTTCGCT CGGCCTGCGC
GAGGGCCCGA CCCTGCGCAA GGTGATCATC CCCCAGGCAC TGCGGGTGAT CATTCCGCCG
CTGACCAGCC AGTACCTGAA CCTTGCGAAG AACTCGTCGC TGGCGGCCGG TATCGGCTAC
CCGGAAATGG TCTCACTGTT CGCCGGTACC GTGCTCAACC AGACCGGCCA GGCCATCGAG
GTGATCGCCA TCACCATGAG TGTCTATCTC GCCATCAGCA TCAGCATTTC GCTGCTGATG
AACTGGTACA ACAAGCGCAT TGCGCTGATC GAGCGGTGA
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| Protein sequence | MQNQIGAPKG LSLNDPRVRA WLFQILTIVF VVGLGWYLFH NTQTNLQHRG ITSGFDFLDR
SAGFGIAQHL IPYVESDSYA RVFVIGLLNT LLVTFIGVIL ATILGFIIGV ARLSPNWMIN
KLATVYVETF RNIPPLLQIL FWYFAVFLTL PGPRGSINID DMFFISNRGL NMPGASMADG
FWPFAVAVVV AIAAIAVMVR MANKRFDETG VPFHKFWAGL ALLIAIPGLS VLLFGSPVTW
EVPQLKGFNF VGGWVLIPEL LALTLALTIY TAAFIAEIVR SGIRSVSHGQ TEAARSLGLR
EGPTLRKVII PQALRVIIPP LTSQYLNLAK NSSLAAGIGY PEMVSLFAGT VLNQTGQAIE
VIAITMSVYL AISISISLLM NWYNKRIALI ER
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