Gene PputGB1_4548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4548 
Symbol 
ID5872356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5082740 
End bp5083900 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content63% 
IMG OID641549681 
Product2-alkenal reductase 
Protein accessionYP_001670770 
Protein GI167035539 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGG CTTTGCGTTA CTTTGGCTGG CCCCTGCTTA CCGGCGTACT GATCGCCATG 
CTGATCATCC AGCGTTTCCC GGAATGGGTC GGCCTGCCCA GCCAGGACGT CAACCTGCAG
CAAGCACCGC AGACCACGCG GATCATGCAA GGCCCGGTGT CGTACGCCGA CGCCGTGACA
TTGGCCGCCC CGGCTGTGGT CAACCTGTAC ACCACCAAGG TGGTGAACAA AAGCGCTCAC
CCGCTCTTCG AAGACCCGCA GTTCCGCCGC TTTTTCGGCG ACAACCTGCC CAAGCAGCGC
CGCTGGGAAT CAAGCCTGGG CTCGGCGGTG ATCATGAGCC CCGAGGGCTA CCTGCTGACC
AACAACCACG TCACCAGCGG CGCCGACCAG ATCGTCGTTG CGCTGAAGGA TGGCCGCGAA
ACCTTGGCCC GCGTGATCGG CAGCGACCCG GAAACCGACC TGGCGGTGCT CAAGATCGAC
CTGAAGAATC TGCCGGCAAT CACCATCGGC CGTTCCGACA ACATCCATAT CGGCGACGTG
TCGCTGGCCA TCGGCAACCC GTTTGGCGTC GGCCAGACCG TGACCATGGG CATCATCAGC
GCCACCGGCC GCAACCAGCT GGGCCTGAAC AACTACGAAG ACTTCATCCA GACCGACGCG
GCGATCAACC CCGGCAATTC GGGTGGCGCG CTGGTGGATG CCAATGGCAA CCTGGTCGGC
ATCAACACGG CAATCTTTTC CAAGTCCGGC GGCTCGCAAG GCATCGGTTT TGCCATCCCG
GTAAAACTGG CACTGGAGGT GATGAAGTCG ATCGTCGAGC ATGGCCAGGT GATTCGTGGC
TGGCTGGGTA TCGAAGTGCA GCCGCTGAGC CAGGAGCTGG CCGAGTCGTT CGGCATGAAG
GACCGCCCAG GCATCGTGGT GGCGGGTATC TTCCGCGAAG GGCCGGCGGC CAAGGCCGGG
CTGCAGCTGG GTGACGTGAT CCTGAGCATC AACGGCGAGC CGGCCGGTGA CGGGCGCAAG
TCGATGAACC AGGTGGCGCG GATCAAGCCC AATGAGAAGA TCACCATCGA GGTGATGCGC
AATGGGCAGC AATTGAAGCT GGTTGCCGAG GTGGGGCTGC GGCCGCCGCC GGCGCCGGCT
GCCAACCCGG AAGAGAAATA A
 
Protein sequence
MFKALRYFGW PLLTGVLIAM LIIQRFPEWV GLPSQDVNLQ QAPQTTRIMQ GPVSYADAVT 
LAAPAVVNLY TTKVVNKSAH PLFEDPQFRR FFGDNLPKQR RWESSLGSAV IMSPEGYLLT
NNHVTSGADQ IVVALKDGRE TLARVIGSDP ETDLAVLKID LKNLPAITIG RSDNIHIGDV
SLAIGNPFGV GQTVTMGIIS ATGRNQLGLN NYEDFIQTDA AINPGNSGGA LVDANGNLVG
INTAIFSKSG GSQGIGFAIP VKLALEVMKS IVEHGQVIRG WLGIEVQPLS QELAESFGMK
DRPGIVVAGI FREGPAAKAG LQLGDVILSI NGEPAGDGRK SMNQVARIKP NEKITIEVMR
NGQQLKLVAE VGLRPPPAPA ANPEEK