Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4548 |
Symbol | |
ID | 5872356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5082740 |
End bp | 5083900 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641549681 |
Product | 2-alkenal reductase |
Protein accession | YP_001670770 |
Protein GI | 167035539 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family [TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAGG CTTTGCGTTA CTTTGGCTGG CCCCTGCTTA CCGGCGTACT GATCGCCATG CTGATCATCC AGCGTTTCCC GGAATGGGTC GGCCTGCCCA GCCAGGACGT CAACCTGCAG CAAGCACCGC AGACCACGCG GATCATGCAA GGCCCGGTGT CGTACGCCGA CGCCGTGACA TTGGCCGCCC CGGCTGTGGT CAACCTGTAC ACCACCAAGG TGGTGAACAA AAGCGCTCAC CCGCTCTTCG AAGACCCGCA GTTCCGCCGC TTTTTCGGCG ACAACCTGCC CAAGCAGCGC CGCTGGGAAT CAAGCCTGGG CTCGGCGGTG ATCATGAGCC CCGAGGGCTA CCTGCTGACC AACAACCACG TCACCAGCGG CGCCGACCAG ATCGTCGTTG CGCTGAAGGA TGGCCGCGAA ACCTTGGCCC GCGTGATCGG CAGCGACCCG GAAACCGACC TGGCGGTGCT CAAGATCGAC CTGAAGAATC TGCCGGCAAT CACCATCGGC CGTTCCGACA ACATCCATAT CGGCGACGTG TCGCTGGCCA TCGGCAACCC GTTTGGCGTC GGCCAGACCG TGACCATGGG CATCATCAGC GCCACCGGCC GCAACCAGCT GGGCCTGAAC AACTACGAAG ACTTCATCCA GACCGACGCG GCGATCAACC CCGGCAATTC GGGTGGCGCG CTGGTGGATG CCAATGGCAA CCTGGTCGGC ATCAACACGG CAATCTTTTC CAAGTCCGGC GGCTCGCAAG GCATCGGTTT TGCCATCCCG GTAAAACTGG CACTGGAGGT GATGAAGTCG ATCGTCGAGC ATGGCCAGGT GATTCGTGGC TGGCTGGGTA TCGAAGTGCA GCCGCTGAGC CAGGAGCTGG CCGAGTCGTT CGGCATGAAG GACCGCCCAG GCATCGTGGT GGCGGGTATC TTCCGCGAAG GGCCGGCGGC CAAGGCCGGG CTGCAGCTGG GTGACGTGAT CCTGAGCATC AACGGCGAGC CGGCCGGTGA CGGGCGCAAG TCGATGAACC AGGTGGCGCG GATCAAGCCC AATGAGAAGA TCACCATCGA GGTGATGCGC AATGGGCAGC AATTGAAGCT GGTTGCCGAG GTGGGGCTGC GGCCGCCGCC GGCGCCGGCT GCCAACCCGG AAGAGAAATA A
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Protein sequence | MFKALRYFGW PLLTGVLIAM LIIQRFPEWV GLPSQDVNLQ QAPQTTRIMQ GPVSYADAVT LAAPAVVNLY TTKVVNKSAH PLFEDPQFRR FFGDNLPKQR RWESSLGSAV IMSPEGYLLT NNHVTSGADQ IVVALKDGRE TLARVIGSDP ETDLAVLKID LKNLPAITIG RSDNIHIGDV SLAIGNPFGV GQTVTMGIIS ATGRNQLGLN NYEDFIQTDA AINPGNSGGA LVDANGNLVG INTAIFSKSG GSQGIGFAIP VKLALEVMKS IVEHGQVIRG WLGIEVQPLS QELAESFGMK DRPGIVVAGI FREGPAAKAG LQLGDVILSI NGEPAGDGRK SMNQVARIKP NEKITIEVMR NGQQLKLVAE VGLRPPPAPA ANPEEK
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