Gene PputGB1_4536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4536 
Symbol 
ID5872344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5071335 
End bp5072339 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content61% 
IMG OID641549669 
ProductAraC family transcriptional regulator 
Protein accessionYP_001670758 
Protein GI167035527 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATGA TGTTTACCCA ACCCTCCGCG TCGCTGCGGC GCGTCAGCAT CCTGGCCATT 
GACAAGGTGT TTGCTTCGAC CTTGATGCAG GCCAAGGACT TCTTCCACCT CGCCAGCCTG
CGCTACAGCA AGCAGCTGGG CCTGGGTTTG CAGCCCATGT TCGAAATCCG CCTGGTGAGC
CCCGACGGCC AACCTGTGGA CAGCTTCAGC AATGTGCAGC TACCGGTCGA TGGCGGCCTG
GACGACGCCG ATGTGATCAT TCTCCCGGCC TACTGGGATG ACTTCGACAA CCTCCTGCAA
CGTTACCCGC AGGTGCTGCC GTGGCTGCGT GAGCAGCACG CGCGTGGCGC GGTGCTGTGC
GCCGAGGCCA GTGGCGTGTT CTGGCTGGCC GAGTCGGGCC TGCTCGACGG CAAGGAGGCC
ACCACCTACT GGCGCTTCTT CAGCAGCTTT GCCGAACGCT TCCCGAAGAT CCGCCTGAAC
CAGGACAAGC ACCTGACCGA TGCCGACAAT ATCTATTGCG CCGGCGGTGC AACTTCAGCC
TGCGACCTGT ACATCTACCT GATCGAGCGC TTCTGCGGTG CCAATGTGGC CCGTGCGGTG
TCACGCGACA TTCTTTACGA AGTGCAACGC AACTACACCC CGGGGCGCAT GGGCTTTGGC
GGGCAAAAAC TGCACCAGGA CCTGATCATC CTGCAGATTC AGCACTGGCT GGAAGAGCAC
TTCGCCGACA AGTTCCGCTT CGAAGATGTG GCCCGCAACC ACGGCATGAG CATCCGCAAC
TTCATGCGCC GGTTCCAGGG CGCAACGGGT GACAAGCCGC TGCACTACCT GCAACGGCTA
CGCATCGAGA CAGCCAAGGG GTTGTTGTCG AGCACGCGCA AGAGCATCAA GACCATCAGC
TACGAGGTCG GTTATGACGA TGCCAGTTTC TTCGCGCGGC TGTTTCGCCA GCACACCGAG
CTGTCACCAA ACCAGTATCG GCAGCAGTTC ATGCAAGAGG CTTGA
 
Protein sequence
MTMMFTQPSA SLRRVSILAI DKVFASTLMQ AKDFFHLASL RYSKQLGLGL QPMFEIRLVS 
PDGQPVDSFS NVQLPVDGGL DDADVIILPA YWDDFDNLLQ RYPQVLPWLR EQHARGAVLC
AEASGVFWLA ESGLLDGKEA TTYWRFFSSF AERFPKIRLN QDKHLTDADN IYCAGGATSA
CDLYIYLIER FCGANVARAV SRDILYEVQR NYTPGRMGFG GQKLHQDLII LQIQHWLEEH
FADKFRFEDV ARNHGMSIRN FMRRFQGATG DKPLHYLQRL RIETAKGLLS STRKSIKTIS
YEVGYDDASF FARLFRQHTE LSPNQYRQQF MQEA