Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4536 |
Symbol | |
ID | 5872344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5071335 |
End bp | 5072339 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641549669 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001670758 |
Protein GI | 167035527 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATGA TGTTTACCCA ACCCTCCGCG TCGCTGCGGC GCGTCAGCAT CCTGGCCATT GACAAGGTGT TTGCTTCGAC CTTGATGCAG GCCAAGGACT TCTTCCACCT CGCCAGCCTG CGCTACAGCA AGCAGCTGGG CCTGGGTTTG CAGCCCATGT TCGAAATCCG CCTGGTGAGC CCCGACGGCC AACCTGTGGA CAGCTTCAGC AATGTGCAGC TACCGGTCGA TGGCGGCCTG GACGACGCCG ATGTGATCAT TCTCCCGGCC TACTGGGATG ACTTCGACAA CCTCCTGCAA CGTTACCCGC AGGTGCTGCC GTGGCTGCGT GAGCAGCACG CGCGTGGCGC GGTGCTGTGC GCCGAGGCCA GTGGCGTGTT CTGGCTGGCC GAGTCGGGCC TGCTCGACGG CAAGGAGGCC ACCACCTACT GGCGCTTCTT CAGCAGCTTT GCCGAACGCT TCCCGAAGAT CCGCCTGAAC CAGGACAAGC ACCTGACCGA TGCCGACAAT ATCTATTGCG CCGGCGGTGC AACTTCAGCC TGCGACCTGT ACATCTACCT GATCGAGCGC TTCTGCGGTG CCAATGTGGC CCGTGCGGTG TCACGCGACA TTCTTTACGA AGTGCAACGC AACTACACCC CGGGGCGCAT GGGCTTTGGC GGGCAAAAAC TGCACCAGGA CCTGATCATC CTGCAGATTC AGCACTGGCT GGAAGAGCAC TTCGCCGACA AGTTCCGCTT CGAAGATGTG GCCCGCAACC ACGGCATGAG CATCCGCAAC TTCATGCGCC GGTTCCAGGG CGCAACGGGT GACAAGCCGC TGCACTACCT GCAACGGCTA CGCATCGAGA CAGCCAAGGG GTTGTTGTCG AGCACGCGCA AGAGCATCAA GACCATCAGC TACGAGGTCG GTTATGACGA TGCCAGTTTC TTCGCGCGGC TGTTTCGCCA GCACACCGAG CTGTCACCAA ACCAGTATCG GCAGCAGTTC ATGCAAGAGG CTTGA
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Protein sequence | MTMMFTQPSA SLRRVSILAI DKVFASTLMQ AKDFFHLASL RYSKQLGLGL QPMFEIRLVS PDGQPVDSFS NVQLPVDGGL DDADVIILPA YWDDFDNLLQ RYPQVLPWLR EQHARGAVLC AEASGVFWLA ESGLLDGKEA TTYWRFFSSF AERFPKIRLN QDKHLTDADN IYCAGGATSA CDLYIYLIER FCGANVARAV SRDILYEVQR NYTPGRMGFG GQKLHQDLII LQIQHWLEEH FADKFRFEDV ARNHGMSIRN FMRRFQGATG DKPLHYLQRL RIETAKGLLS STRKSIKTIS YEVGYDDASF FARLFRQHTE LSPNQYRQQF MQEA
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