Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4511 |
Symbol | murC |
ID | 5872318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5046990 |
End bp | 5048438 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641549644 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_001670733 |
Protein GI | 167035502 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.979703 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAGA GCCAGAAAGC CATGCCCCAG CCGAAGATGG GCCGTATTCG CCGTATTCAC TTCGTCGGTA TCGGCGGCGT GGGCATGTGC GGTATTGCCG AAGTGCTGCT GAACCTGGGC TATGAAGTGT CCGGTTCCGA CCTTAAAGCT TCGCCGGTCA CCGAGCGCCT GGAATCGTTC GGCGCCGAGA TTTTCGTTGG CCACCGTGCC GAGAACGCCG CCACCGCCGA CGTGCTGGTG GTGTCCAGCG CCATCAACCC GGCCAACCCG GAAGTGGCCA CCGCCCTCGA GCGGCGCATC CCAGTGGTAC CGCGTGCCGA GATGCTGGCT GAGCTGATGC GCTATCGCCA CGGCGTTGCC GTTGCCGGTA CCCATGGCAA GACCACCACC ACCAGCCTGC TGGCGTCGGT GTTCGCCGCC GGTGGCCTGG ACCCGACCTT CGTCATCGGT GGCCGCCTGA CCGCCGCCGG TACCAATGCC CAGCTGGGCA CCAGCCGCTA CCTGATCGCC GAAGCAGACG AAAGCGATGC CAGCTTCCTG CACCTGCAGC CGATGGTGGC CGTGGTCACC AACATCGACG CCGACCACAT GGCGACCTAC GAAGGTGACT TCAACAAGCT GAAGAAAACC TTCGTCGAGT TTCTGCACAA CCTGCCGTTC TACGGCCTGG CCGTGATGTG CCTGGACGAC CCGGTGGTGC GCGAAATCCT GCCGCAGGTG AAGCGTCCGA CCGTGACCTA CGGCTTCAGC GAAGAGGCCG ACATCCGCGC CATCAACGTG CGCCAGCAGG GCATGCAGAC CCACTTCACC GTGCTGCGCC GTGACTGCGA GCCATTGGAG GTGTCGGTGA ACATGCCCGG CAACCACAAC GTGCTCAACG CCTTGGCCAC CATCGCCATT GCCACTGACG AAGGCATCAC TGACGAAGCC ATCATCCAAG GCCTTTCTGG CTTCCAGGGT GTCGGCCGTC GCTTCCAGGT GTACGGCGAG CTGCCGGTCG AAGGCGGCAG CGTGATGCTG GTCGACGACT ATGGTCATCA CCCGACCGAA GTGGCCGCGG TGATCAAGGC CGTGCGCGGT GGCTGGCCAA GCCGTCGCCT GGTGATCGTT TACCAGCCGC ACCGCTACAG CCGCACCCGC GACCTGTATG ACGATTTCGT CCAGGTACTG GGCGATGCCA ACGTGCTGCT GCTGATGGAA GTGTACCCGG CCGGCGAAGA GCCGATCCCC GGTGCCGACA GCCGTCAGCT GTGCCACAGC ATCCGTCAGC GCGGCAAGCT GGACCCGATC TATATCGAGC GTGGCGCCGA GCTGGCGCCG CTGGTCAAGC CACTGCTGCG CGCTGGTGAC ATCCTGATCT GCCAGGGTGC CGGCGATGTT GGCGGCCTGG CCCCGCAGTT GATGAAAAGC CCGCTGTTCG CAGGCGCCAA GCAGGAGAAG TCGAAATGA
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Protein sequence | MVESQKAMPQ PKMGRIRRIH FVGIGGVGMC GIAEVLLNLG YEVSGSDLKA SPVTERLESF GAEIFVGHRA ENAATADVLV VSSAINPANP EVATALERRI PVVPRAEMLA ELMRYRHGVA VAGTHGKTTT TSLLASVFAA GGLDPTFVIG GRLTAAGTNA QLGTSRYLIA EADESDASFL HLQPMVAVVT NIDADHMATY EGDFNKLKKT FVEFLHNLPF YGLAVMCLDD PVVREILPQV KRPTVTYGFS EEADIRAINV RQQGMQTHFT VLRRDCEPLE VSVNMPGNHN VLNALATIAI ATDEGITDEA IIQGLSGFQG VGRRFQVYGE LPVEGGSVML VDDYGHHPTE VAAVIKAVRG GWPSRRLVIV YQPHRYSRTR DLYDDFVQVL GDANVLLLME VYPAGEEPIP GADSRQLCHS IRQRGKLDPI YIERGAELAP LVKPLLRAGD ILICQGAGDV GGLAPQLMKS PLFAGAKQEK SK
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