| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4506 |
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| Symbol | lpxC |
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| ID | 5872313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5041609 |
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| End bp | 5042520 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641549639 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_001670728 |
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| Protein GI | 167035497 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000000422778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.536505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAAAC AACGCACCCT GAAGAATACC ATCCGTGCCA CAGGTGTCGG TCTGCACTCC
GGGGAGAAGG TTTACCTGAC CCTCAAGCCT GCACCTGTTG ACACCGGCAT CGTCTTCCGC
CGCGCCGACC TCGACCCTGT GGTCGAGATC CCTGCGCGTG CGGCCAACGT CGGCGAGACA
ACCATGTCGA CGACGCTGGT CAACGGTGAC GTCAAGGTCG ATACGGTCGA GCACCTGCTC
TCCGCCATGG CGGGCCTGGG CATCGATAAC GCCTACGTCG AGCTCTCCGC CTCGGAAGTG
CCGATCATGG ATGGCAGCGC CGGACCCTTT GTATTTCTGA TTCAGTCTGC CGGCCTGGAA
GAACAGGACG CAGCCAAGAA GTTCATCCGC ATCCTGCGTG AGGTAACTGT GGAAGAGGGC
GACAAGCGCG CCACATTCCT GCCTTTCGAA GGGTTCAAGG TGAGCTTCGA GATCGACTTC
GATCACCCGG TGCTTCGCAA CCGGACCCAA AGCGCCAGCG TCGACTTTTC CAGCACCTCG
TTCGTGAAGG AAGTCAGCCG CGCGCGTACC TTCGGCTTCA TGCGTGATAT CGAGTACCTG
CGCAAGCACA ACCTTGCGTT GGGTGGCAGT GTCGAGAACG CCATCGTGGT CGATGAGGAC
GGCGTGCTCA ACGAAGACGG CCTTCGTTAC GAAGACGAAT TCGTCAAGCA CAAGATCCTC
GACGCCATTG GCGACCTGTA CCTGCTGGGC AACAGCTTGA TTGGCGAGTT CAAGGGCTAC
AAGTCCGGCC ACGCGCTGAA CAACCAGTTG CTGCGCAAGC TGATTGCTGA AACCGATGCC
TGGGAAGTGG TCACTTTCGA AGATGCCAGT ACGGCACCGA TCTCGTACAT GCGCCCTGTT
GCGGCCGTGT AA
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| Protein sequence | MIKQRTLKNT IRATGVGLHS GEKVYLTLKP APVDTGIVFR RADLDPVVEI PARAANVGET
TMSTTLVNGD VKVDTVEHLL SAMAGLGIDN AYVELSASEV PIMDGSAGPF VFLIQSAGLE
EQDAAKKFIR ILREVTVEEG DKRATFLPFE GFKVSFEIDF DHPVLRNRTQ SASVDFSSTS
FVKEVSRART FGFMRDIEYL RKHNLALGGS VENAIVVDED GVLNEDGLRY EDEFVKHKIL
DAIGDLYLLG NSLIGEFKGY KSGHALNNQL LRKLIAETDA WEVVTFEDAS TAPISYMRPV
AAV
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