Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4505 |
Symbol | |
ID | 5872312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5041100 |
End bp | 5041555 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641549638 |
Product | hypothetical protein |
Protein accession | YP_001670727 |
Protein GI | 167035496 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.000389369 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.62283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCTACA AACCCTCCCC CGCCCAGCCG CCCTCCGCCC TGCTGCGCCA GGTGCGCCCA CTGCGCCTGC TGCTGAACCA GGCCGAGCGC CTGGAGCACC TGCAGCGCCT GCTGGAAAGC CAACTGCAAC CGGCGGCCCG CGAGCACTGT CACGTGGCGT CGTGGCGTGA TGGCACCTTG TTGCTGGTGG TGACCGACGG CCATTGGGCA ACCCGCCTGC GCTACCAGCA GAAGCGTTTG CTGGCGGCAT TGCAGGCCAT GGAAGCCTTC GGCAACCTCA GGCGCATCCT GTACAAGGTG CAGCCGCCGC TGGTGCCGGC CAAGCGTGGT GGGCACGCCG CAGAGCTGTC GAACAGCGCA GCCGAAAGCC TGCGCGATAC CGCCGAGGGC ATCACCGACC CCAAGCTGCG CGCAGCGCTG GAACGGCTGG CAGCCCACGC TCAGCACAAG CCATAA
|
Protein sequence | MAYKPSPAQP PSALLRQVRP LRLLLNQAER LEHLQRLLES QLQPAAREHC HVASWRDGTL LLVVTDGHWA TRLRYQQKRL LAALQAMEAF GNLRRILYKV QPPLVPAKRG GHAAELSNSA AESLRDTAEG ITDPKLRAAL ERLAAHAQHK P
|
| |