| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4504 |
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| Symbol | secA |
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| ID | 5872311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5038063 |
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| End bp | 5040798 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641549637 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001670726 |
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| Protein GI | 167035495 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.626117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.321906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCGC CTTTGTTAAA AAAACTTTTT GGAAGCAAGA ACGAGCGTGA AGTCAAACGC
ATGCTCAAGA CGGTGAGTAT CGTCAATGCC TTCGAAGAGA AGATGGTGGC CCTCTCCGAC
GAGCAGCTGC GGGGCAAGAC CGCAGAGTTC AAGGAGCGCC TGGCCAAAGG CGAGACACTG
GACCAATTGC TGCCCGAAGC CTTCGCCGTG GCCCGTGAGG CCGGCAAGCG CGTAATGGGC
ATGCGCCACT TCGACGTGCA GCTGATCGGT GGTATGACCC TGCACGAGGG TATGATCGCA
GAAATGCGCA CCGGTGAAGG CAAGACCTTG GTCGGTACCC TGGCCGTGTA CCTCAACGCA
TTGTCCGGCA AGGGCGTGCA CGTGGTCACC GTCAACGACT ACCTGGCCCG CCGTGACGCC
AACTGGATGC GCCCGCTGTA CGAGTTCCTC GGCCTGTCGG TCGGTATCGT CTCGGCCTTC
CAGCCGCCGG AAGAAAAGCG CGCCGCTTAT GCGTCCGACA TCACCTACGG CACCAACAAC
GAATTCGGTT TCGACTACCT GCGCGACAAC ATGGCGTTCA GCCAGGAGGA GAAGTTCCAG
CGTGAACTGA ACTTCGCCGT GATCGACGAA GTCGACTCGA TCCTCATCGA CGAAGCGCGT
ACCCCGCTGA TCATTTCCGG CCAGGCTGAA GACAGCTCCA AGCTGTACAT CGAAATCAAC
CGCCTGATCC CGCGCCTGAC CCAGCACATC GAAGAGGTCG AAGGCCAGGT CACCCAGGAA
GGCCACTTCA CCATCGACGA GAAGAGCCGT CAGGTCGAGC TGAACGAGGC CGGTCACCAG
TTCATCGAAG AGATGCTGAC CCAAGCGGGC CTGCTGGCCG AAGGCGAGAG CCTGTACTCC
GCCCATAACT TGGGCCTGTT GACCCACGTT TACGCTGGCC TGCGCGCGCA CAAACTGTTC
CACCGCAACG TCGAGTACAT CGTCCAGGAC GGCCAGGTCC TGCTGATCGA CGAGCACACC
GGCCGTACCA TGCCGGGCCG TCGTCTGTCC GAGGGCCTGC ACCAGGCCAT CGAGGCGAAA
GAAAACCTGA ACATCCAGGC CGAGAGCCAG ACCCTGGCTT CGACCACCTT CCAGAACTAC
TTCCGCCTGT ACACCAAGCT GTCCGGCATG ACCGGTACCG CCGACACCGA AGCGTTCGAG
TTCCAGTCGA TCTACGCCCT CAACGTGATG GTCATTCCGC CGAACAAGCC GCTGGCGCGC
AAGGACTTCA ACGACCTGGT GTACCTGACC GCCGACGAGA AATACGCCGC GATCATTGCC
GACATCAAGG AAAGCATGAC CAAGGGGCGG CCGATCCTGG TGGGTACCGC GACCATCGAA
ACTTCCGAGC ACATGTCGAA CCTGCTCAAG AAGGAAGGCA TCGACCACAA GGTACTGAAC
GCCAAGTACC ACGAAAAGGA AGCCGAGATC ATCGCGCAAG CGGGTGCTCC GGGTGCCCTG
ACCATCGCCA CCAACATGGC TGGCCGTGGT ACCGACATCC TGTTGGGCGG TAACTGGGAA
GCCGAAGTGG CCGCCCTGGA AAACCCGAGC GCCGAACAGA TCGCCCAGAT CAAGGCCGAC
TGGCAGAAGC GTCACCAGCA GGTGATCGAG GCCGGTGGCC TGCACGTAAT CGCCTCCGAA
CGTCACGAAT CGCGTCGAAT CGACAACCAG CTGCGTGGCC GTTCCGGCCG TCAGGGCGAC
CCAGGCTCCA GCCGCTTCTA CCTGTCGCTG GAAGACAGCC TGATGCGCAT CTTCGCCTCT
GACCGGGTGA AGAACTTCAT GAAGGCACTG GGCATGCAGT CGGGCGAGGC CATCGAGCAC
CGCATGGTCA CCAACGCCAT CGAGAAGGCC CAGCGCAAGG TCGAAGGCCG CAACTTCGAC
ATCCGTAAGC AACTGCTCGA ATACGACGAC GTGGCCAACG AGCAGCGCAA GGTGATCTAC
CACATGCGCA ACAGCCTGTT GGCCGCCGAG AACATCGGCG ACACCATCGT CGAATTCCGC
CAGGAAGTTC TGGACGCTAC CATCAGCCAG CACATTCCGC CGCAGTCGCT GCCCGAGCAG
TGGGACGTGG CCGGCCTGGA AGCTTCGCTG GCCAGCGATT TCGCCATGAA GCTGCCGATT
CAGCAGTGGC TCGACGAGGA TGATCACCTC TACGAAGAGA CCCTGCGCGA GAAGCTGCTT
AACGAAATCA CTACCGCCTA CACCGAGAAG GAAGACCAGG CCGGTATCGA AGCCCTGCGT
ACCTTCGAGA AACAGATCCT GCTGCGCGTG CTGGACGACC TGTGGAAAGA CCACCTGTCG
ACCATGGACC ACCTGCGTCA CGGTATTCAC CTGCGCGGCT ATGCGCAGAA GAACCCGAAG
CAGGAGTACA AGCGCGAGTC GTTCAGCCTG TTCCAGGAGC TGCTGGAGTC GATCAAGCGC
GACACCATCC GCGTGCTGTC GCACGTACAG GTTCGCCGCG AAGACCCTAT CGAAGAAGAA
GCCCGCCTGC GTCGCGAGGC CGAAGAACTG GCCAGCCGCA TGCAGTTCCA GCACGCCGCC
GCACCGGGCC TGGAAAGCGA GCAACTGAGC GAGGAGGGTG CCGAAGTGGC GGTAGCCGCG
GCGCCAGTAC GTAACGACCA GAAGCTGGGC CGCAACGAAC CGTGCTGGTG TGGTTCGGGC
AAGAAGTTCA AGCATTGCCA CGGGCAGATC GAGTGA
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| Protein sequence | MFAPLLKKLF GSKNEREVKR MLKTVSIVNA FEEKMVALSD EQLRGKTAEF KERLAKGETL
DQLLPEAFAV AREAGKRVMG MRHFDVQLIG GMTLHEGMIA EMRTGEGKTL VGTLAVYLNA
LSGKGVHVVT VNDYLARRDA NWMRPLYEFL GLSVGIVSAF QPPEEKRAAY ASDITYGTNN
EFGFDYLRDN MAFSQEEKFQ RELNFAVIDE VDSILIDEAR TPLIISGQAE DSSKLYIEIN
RLIPRLTQHI EEVEGQVTQE GHFTIDEKSR QVELNEAGHQ FIEEMLTQAG LLAEGESLYS
AHNLGLLTHV YAGLRAHKLF HRNVEYIVQD GQVLLIDEHT GRTMPGRRLS EGLHQAIEAK
ENLNIQAESQ TLASTTFQNY FRLYTKLSGM TGTADTEAFE FQSIYALNVM VIPPNKPLAR
KDFNDLVYLT ADEKYAAIIA DIKESMTKGR PILVGTATIE TSEHMSNLLK KEGIDHKVLN
AKYHEKEAEI IAQAGAPGAL TIATNMAGRG TDILLGGNWE AEVAALENPS AEQIAQIKAD
WQKRHQQVIE AGGLHVIASE RHESRRIDNQ LRGRSGRQGD PGSSRFYLSL EDSLMRIFAS
DRVKNFMKAL GMQSGEAIEH RMVTNAIEKA QRKVEGRNFD IRKQLLEYDD VANEQRKVIY
HMRNSLLAAE NIGDTIVEFR QEVLDATISQ HIPPQSLPEQ WDVAGLEASL ASDFAMKLPI
QQWLDEDDHL YEETLREKLL NEITTAYTEK EDQAGIEALR TFEKQILLRV LDDLWKDHLS
TMDHLRHGIH LRGYAQKNPK QEYKRESFSL FQELLESIKR DTIRVLSHVQ VRREDPIEEE
ARLRREAEEL ASRMQFQHAA APGLESEQLS EEGAEVAVAA APVRNDQKLG RNEPCWCGSG
KKFKHCHGQI E
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