| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4501 |
|---|
| Symbol | |
|---|
| ID | 5872308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5034947 |
|---|
| End bp | 5035891 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641549634 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001670723 |
|---|
| Protein GI | 167035492 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0352] Thiamine monophosphate synthase
[COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00586] mutator mutT protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.523087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.745544 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACGGA TACATGTTGT AGCTGCGGTC ATTCGTGGTA CTGACGGCCG CATTCTGATT
GCACGCAGGG CCGATACCCA GCACCAGGGC GGCCTGTGGG AGTTTCCCGG CGGCAAAGTG
GAGGAGGGGG AAGGCGTGGA AGCGGCATTG GCCCGTGAGC TGCGCGAGGA GCTGGGCATC
GAGGTGACCC GCTCGCGTGC GCTGATCAAG GTCAGCCATG ACTACCCGGA CAAACAGGTG
CTGCTGGACG TGCGCGAGGT CGAAGCGTTC ACGGGCGAAC CTCATGGCGC GGAAGGGCAG
CCGCTGGAAT GGGTTGCGCC GCGCGATTTG CCGCAGTACG AATTCCCTGA GGCCAACAAG
CCGATCGTTG CAGCCGCACG CCTGCCGGAC CAGTACCTGA TTACCCCGGA TGGCCTGGAA
GTGCCGCAGA TGCTCAAAGG CATCCAGAGG GCGGTGGCCA ACGGTACGCG CTTGATTCAG
TTGCGGGCGC CGGACATGTA CGACCCCAAG TACCGCGATG TAGCGGTGGA TGCCGTCGGG
CTGTGCGCAG GCAAGGCTCA GTTGATGCTC AAGGGGCCGC TGGAATGGCT GGGCGATTTC
CCGTCGGCGG GTTGGCACCT GACGGCTGCG CAGTTGCGCA AGTACGCCGC CAAAGGCAGG
CCGTTCCCCA AGGAACGCTG GCTGGCGGCG TCCTGCCACA GCGTCGAGGA ACTGGCGCTG
GCTGAGCAGA TGGGCGTGGA CTTTGTCACC TTGTCGCCGG TGCAGGCGAC CCAGACTCAC
CCAGAGGCGG TGCCGCTGGG GTGGGATGAG GCGCAGCGAT TGATTGCCGG GTTCAGCAAG
CCGGTTTACC TGTTGGGCGG GGTAGGGCCG GGCGAGCGCG AGCAGGCCTG GAATGCCGGG
GCACAGGGTG TGGCAGGGAT CCGCGCGTTC TGGCCTGAAA TCTGA
|
|---|
| Protein sequence | MKRIHVVAAV IRGTDGRILI ARRADTQHQG GLWEFPGGKV EEGEGVEAAL ARELREELGI
EVTRSRALIK VSHDYPDKQV LLDVREVEAF TGEPHGAEGQ PLEWVAPRDL PQYEFPEANK
PIVAAARLPD QYLITPDGLE VPQMLKGIQR AVANGTRLIQ LRAPDMYDPK YRDVAVDAVG
LCAGKAQLML KGPLEWLGDF PSAGWHLTAA QLRKYAAKGR PFPKERWLAA SCHSVEELAL
AEQMGVDFVT LSPVQATQTH PEAVPLGWDE AQRLIAGFSK PVYLLGGVGP GEREQAWNAG
AQGVAGIRAF WPEI
|
|---|
| |