Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4490 |
Symbol | fxsA |
ID | 5872297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5023783 |
End bp | 5024244 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549623 |
Product | FxsA |
Protein accession | YP_001670712 |
Protein GI | 167035481 |
COG category | [R] General function prediction only |
COG ID | [COG3030] Protein affecting phage T7 exclusion by the F plasmid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00316913 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCTT TTCTACTGCT GTTTCTGATT TTTCCTGTGC TGGAGCTGTT CGTCTTCGTG AAGGTCAGCG CGGCAATCGG TTTCTTCCCG GCGTTGCTGC TGATCATCGC CGGCTCCGCC CTGGGTGTGC TGGTGATGCG GGTGGCCGGC CTGGCCACCG CACTGCGCGC CCGTGAAAGC CTGCAACGTG GCGAATTGCC CGCCGAGGAC ATGTTCCAGG GCATGATGCT GGCCGTGGGT GGTGGCCTGC TGCTGCTGCC GGGCTTCATC AGCGATGTGC TGGGCGTGCT GTGCCTGCTG CCGTTCACCC GCCGCCTGGC GGCGCGCAAG ATGCGTGAGC GTGCCGAGGC CCAGGCCATG CGTCAGCGTG CGTTCCAGGA TGACCCGTTC CAGGCGCAGC CACGAGAGGG TGGCCATCGC CCGAACGTGA TCGAAGGCGA GTACGAGCGC CGCGACAAGT AA
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Protein sequence | MRAFLLLFLI FPVLELFVFV KVSAAIGFFP ALLLIIAGSA LGVLVMRVAG LATALRARES LQRGELPAED MFQGMMLAVG GGLLLLPGFI SDVLGVLCLL PFTRRLAARK MRERAEAQAM RQRAFQDDPF QAQPREGGHR PNVIEGEYER RDK
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