Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4487 |
Symbol | |
ID | 5872294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5020674 |
End bp | 5021402 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641549620 |
Product | hypothetical protein |
Protein accession | YP_001670709 |
Protein GI | 167035478 |
COG category | [R] General function prediction only |
COG ID | [COG3907] PAP2 (acid phosphatase) superfamily protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.138399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.877135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAAC GCACCCGCCC TCGCCCGATC AACTACTGGC TGTACCTGGG GATACCCCTG GCGACCGCGC TGGCCTTGAT TCTGCTGGAG CTGACTTCGG TCGACATGGA TGTGGCCAAC CTGTTCTTCG ATCCCGTTGC CGGGCAGTTC ATTGGCCGCC ACAGCTACCT TCTGGAAAAC ATCCTGCATG ACCGGGTCAA GCAAGTGGTG ATTTTGCTGG GGGTGCTATC GCTGTTCACC TTTGCTGCGA GCTTTTTCTG GAAGCGCTTG TTCGGCTGGC GCCGCGAATT GGGCTGCCTG GTGCTGGCAC TGGGCTTGTC CACGGCGTTT GTCACACCGC TGAAGAAGGT CACCCAGGTG CAGTGCCCGT GGAGCCTCAC ACAGTTTGGC GGCACGGAAA CCTACAGCAA GCTGCTGGAG CCACGGCCGG CTACCGACAA AGCCGGGCTG TGCTGGCCGG GTGGGCATGC AGCCACCGGG TTCTGCCTGT TCGGCCTGTT CTTCATGTTG CGTGATCGCA AGCCGCGTCT GGCACAGGTG GCATTCGTGG TGGCCTTGAT AGCAGGGTCG GTGCTGTCGG TGGGCAGAAT GATGCAAGGG GCGCACTTCT TGTCGCACAA CGTGTGGACG GCAGTGTTCT GCTGGTTGAT AGGGTTGGGG TCTTATTACC TTGTGCTGTA TCGGCATGGG GTGGCTGAGG AGCCTGTCGT CGAGCGTAGC GTCGCTTGA
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Protein sequence | MQQRTRPRPI NYWLYLGIPL ATALALILLE LTSVDMDVAN LFFDPVAGQF IGRHSYLLEN ILHDRVKQVV ILLGVLSLFT FAASFFWKRL FGWRRELGCL VLALGLSTAF VTPLKKVTQV QCPWSLTQFG GTETYSKLLE PRPATDKAGL CWPGGHAATG FCLFGLFFML RDRKPRLAQV AFVVALIAGS VLSVGRMMQG AHFLSHNVWT AVFCWLIGLG SYYLVLYRHG VAEEPVVERS VA
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