Gene PputGB1_4487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4487 
Symbol 
ID5872294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5020674 
End bp5021402 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content61% 
IMG OID641549620 
Producthypothetical protein 
Protein accessionYP_001670709 
Protein GI167035478 
COG category[R] General function prediction only 
COG ID[COG3907] PAP2 (acid phosphatase) superfamily protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.138399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.877135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAC GCACCCGCCC TCGCCCGATC AACTACTGGC TGTACCTGGG GATACCCCTG 
GCGACCGCGC TGGCCTTGAT TCTGCTGGAG CTGACTTCGG TCGACATGGA TGTGGCCAAC
CTGTTCTTCG ATCCCGTTGC CGGGCAGTTC ATTGGCCGCC ACAGCTACCT TCTGGAAAAC
ATCCTGCATG ACCGGGTCAA GCAAGTGGTG ATTTTGCTGG GGGTGCTATC GCTGTTCACC
TTTGCTGCGA GCTTTTTCTG GAAGCGCTTG TTCGGCTGGC GCCGCGAATT GGGCTGCCTG
GTGCTGGCAC TGGGCTTGTC CACGGCGTTT GTCACACCGC TGAAGAAGGT CACCCAGGTG
CAGTGCCCGT GGAGCCTCAC ACAGTTTGGC GGCACGGAAA CCTACAGCAA GCTGCTGGAG
CCACGGCCGG CTACCGACAA AGCCGGGCTG TGCTGGCCGG GTGGGCATGC AGCCACCGGG
TTCTGCCTGT TCGGCCTGTT CTTCATGTTG CGTGATCGCA AGCCGCGTCT GGCACAGGTG
GCATTCGTGG TGGCCTTGAT AGCAGGGTCG GTGCTGTCGG TGGGCAGAAT GATGCAAGGG
GCGCACTTCT TGTCGCACAA CGTGTGGACG GCAGTGTTCT GCTGGTTGAT AGGGTTGGGG
TCTTATTACC TTGTGCTGTA TCGGCATGGG GTGGCTGAGG AGCCTGTCGT CGAGCGTAGC
GTCGCTTGA
 
Protein sequence
MQQRTRPRPI NYWLYLGIPL ATALALILLE LTSVDMDVAN LFFDPVAGQF IGRHSYLLEN 
ILHDRVKQVV ILLGVLSLFT FAASFFWKRL FGWRRELGCL VLALGLSTAF VTPLKKVTQV
QCPWSLTQFG GTETYSKLLE PRPATDKAGL CWPGGHAATG FCLFGLFFML RDRKPRLAQV
AFVVALIAGS VLSVGRMMQG AHFLSHNVWT AVFCWLIGLG SYYLVLYRHG VAEEPVVERS
VA