| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4483 |
|---|
| Symbol | |
|---|
| ID | 5872290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5017014 |
|---|
| End bp | 5017712 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641549616 |
|---|
| Product | lipopolysaccharide kinase |
|---|
| Protein accession | YP_001670705 |
|---|
| Protein GI | 167035474 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.233298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTAG CCCAGAGAGG GGAGTCGCGC TTCGATTTTT ATTGGCGCCA GCAAGGCGAG
TGGGTCGAGG AGCCTAACCA GCGGCGCGGC GGTGAGAGTG GCGTGCAACG CCTCAACGAT
GCCAATGGCA AGCTGCTGTA TGCCAAACGG CAGGTCGGGC ATATCTACCG CAGCCTGCTG
CACCCTTTCG GCCGGCCTAC GGTATTGCGT GAACTGGATG CGTTGAACAG CTTCGAGCAA
CTGGGCGTGC GTGTACCGCG CATTGTTTTC TGTGGCGCCG AGCGCGATGC CGACCACCAG
TGGCGTGCGC TGCTGGTCAG TGAAGCGCTG GACGGCTTTG TCGAGCTCGA CACCTGGCAT
GCCGAAGGTG CCCGCGAGCG GTACCCACAG GTGGTGCATG AGCGCATGCT CAAGGACCTG
GCGGACAACC TGGCACGCAT GCACCTGGGG CACTGGCAGC ACGGCTGCCT GTATGGCAAG
CACGTGTTCA TCAAGGTAAT TGGCGAGGGT GAGCAGGCCC GCGTCGAGGT GGCGCTGTTG
GACCTGGAAA AGTGCCGACG GCGCATCAGC TGCCAGCGTG CAGCAGGTAA CGACCTGCGC
CAGCTGCGCC GCCATTCGTC GATCAATGAC GCGGAATGGC AGACGCTGCT CTACTTTTAC
AAGATGGCGT TTGGCAGCGC TGTCAAAGGG TTAGAGTAA
|
|---|
| Protein sequence | MAVAQRGESR FDFYWRQQGE WVEEPNQRRG GESGVQRLND ANGKLLYAKR QVGHIYRSLL
HPFGRPTVLR ELDALNSFEQ LGVRVPRIVF CGAERDADHQ WRALLVSEAL DGFVELDTWH
AEGARERYPQ VVHERMLKDL ADNLARMHLG HWQHGCLYGK HVFIKVIGEG EQARVEVALL
DLEKCRRRIS CQRAAGNDLR QLRRHSSIND AEWQTLLYFY KMAFGSAVKG LE
|
|---|
| |