| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4472 |
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| Symbol | |
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| ID | 5872280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5003148 |
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| End bp | 5003747 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641549607 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001670696 |
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| Protein GI | 167035465 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1279] Lysine efflux permease |
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| TIGRFAM ID | [TIGR00948] L-lysine exporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.301556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGGCAAA GCTACCTCAA CGGCATGCTG GTGGCCTTCG GCCTGATCAT GGCCATCGGC
GCGCAGAACG CCTTCGTACT TGCCCAAAGC CTGCGCCGTG AGCATCACCT GCCGGTGGCG
GCACTGTGCA TCGTCTGTGA TGCCCTCCTG GTGGCAGCCG GGGTGTTCGG CCTGGCCACC
GTGCTGGCGC ACAACCCGAC CTTGCTGGCG GTCGCACGCT GGGGCGGCGC GGTGTTTCTG
ATCTGGTACG GCGCCAAGGC CCTGCGCAGC GCCTGCTCCA AGCAGAGCCT GCAGCACCAG
CAAGGCCAGG GCGCCCGCTC ACGCCGTGCC GTGCTGCTCA GCGCCCTGGC GGTGACCCTG
CTAAACCCGC ACGTGTACCT CGACACGGTG TTGCTGATCG GCTCGCTGGG CGCCCAGCAG
ACCGCCCCCG GCGCCTACGT GGCCGGCGCC GCCAGCGCCT CGCTGCTGTG GTTTTCGACC
CTGGCGATCG GCGCGGCCTG GCTGGCCCCA TGGCTGGCAA GGCCGGCGAC CTGGCGCATG
CTCGACCTGA TGGTGGCGGT GATGATGTTC GCGGTGGCAG CGCAGTTGAT CTTCAACTGA
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| Protein sequence | MWQSYLNGML VAFGLIMAIG AQNAFVLAQS LRREHHLPVA ALCIVCDALL VAAGVFGLAT
VLAHNPTLLA VARWGGAVFL IWYGAKALRS ACSKQSLQHQ QGQGARSRRA VLLSALAVTL
LNPHVYLDTV LLIGSLGAQQ TAPGAYVAGA ASASLLWFST LAIGAAWLAP WLARPATWRM
LDLMVAVMMF AVAAQLIFN
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