| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4470 |
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| Symbol | |
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| ID | 5872278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5001112 |
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| End bp | 5002107 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549605 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001670694 |
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| Protein GI | 167035463 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.578152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.10133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATTC TGGTCACCGG CGCGAGTGGC TTCATTGGTG GGCGCTTTGC GCGCTTCGCC
CTGGAGCAGG GCCTGGACGT GCGCGTCAGC GGCCGCCGTG CCGAAGGGGT GGAGCACCTG
GTCAAGCGCG GCGCCCAGTT CATCCCCGGC GACCTGGGCG ATGCCGAGTT GGCCCGGCGT
TTGTGCCAGG GCGTCGAGGC GGTGGTGCAC TGTGCAGGCG CGGTGGGCAA CTGGGGGCGT
TATCAGGACT TCTACCAGGG CAACGTGGTG GTTACCGAGA ATGTGGTCGA GGGCTGCCTG
AAAGAGCATG TACGGCGCCT GGTTCATCTG TCTTCGCCGT CGATCTATTT CAATGGCCGT
TCACGCCTGG ACATCCGTGA AGACCAGGTG CCGCGCCGTT TCCACGACCA CTATGGGCAA
ACCAAACACC TGGCCGAGCA GAAAGTGTTC GGTGCCCAGG AGTTCGGCCT CGAAGTATTG
GCGCTGCGCC CGCGCTTCGT CACCGGCGCC GGCGATGCCA GCATTTTCCC GCGGCTGATG
CAGATGCAGC GCAAAGGCCG TGTGGCGATC ATCGGCAATG GCCTGAACAA GGTCGATTTC
ACCAGTGTGC ACAACCTCAA CGAGGCGCTG CTCAGTGCGC TGTTCGTTGA TGAACGGGCG
CTGGGCCAGG CTTACAACAT CAGCAACGGG CAGCCGCTGC CGCTGTGGGA CGTGGTCAAC
TACGTGATGC GCCAGATGCA GTTGCCACAG GTTACCCGCT ACCGTTCCTA CGGCCTGGCC
TACAGCTTCG CCGCGCTGAA CGAGGCGGCT TGCATGCTGT GGCCAGGGCG CCCGCAACCG
ACCTTGTCGC GCCTGGGCAT GCAGGTGATG AGCCGTGATT TCACCCTGGA TATCAGCCGC
GCCCGGCAAT ACCTGGACTA CCAGCCCAAA GTCAGCCTGT GGACGGCGCT GGATGAATTC
TGTGGCTGGT GGAAGCACTT GCCGCCGGGG CATTGA
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| Protein sequence | MRILVTGASG FIGGRFARFA LEQGLDVRVS GRRAEGVEHL VKRGAQFIPG DLGDAELARR
LCQGVEAVVH CAGAVGNWGR YQDFYQGNVV VTENVVEGCL KEHVRRLVHL SSPSIYFNGR
SRLDIREDQV PRRFHDHYGQ TKHLAEQKVF GAQEFGLEVL ALRPRFVTGA GDASIFPRLM
QMQRKGRVAI IGNGLNKVDF TSVHNLNEAL LSALFVDERA LGQAYNISNG QPLPLWDVVN
YVMRQMQLPQ VTRYRSYGLA YSFAALNEAA CMLWPGRPQP TLSRLGMQVM SRDFTLDISR
ARQYLDYQPK VSLWTALDEF CGWWKHLPPG H
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