| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4468 |
|---|
| Symbol | |
|---|
| ID | 5872276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4999038 |
|---|
| End bp | 5000087 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641549603 |
|---|
| Product | NADH:flavin oxidoreductase/NADH oxidase |
|---|
| Protein accession | YP_001670692 |
|---|
| Protein GI | 167035461 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.101693 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC TTTTCGATCC GATCACCCTG GGCGACCTGC AACTGCCCAA CCGCATCATC
ATGGCCCCGC TCACCCGCTG CCGCGCCGAT GAAGGGCGCG TGCCCAATGC GCTGATGGCC
GAGTACTACG TACAGCGTGC CAGTGCCGGG CTGATTCTCA GCGAGGCGAC CTCGGTCAGC
GCCATGGGGG TCGGCTACCC GGATACCCCC GGTATCTGGA ACGATGAACA AGTTCGTGGC
TGGAACAATG TGACCAAGGC CGTACACGGC GCAGGCGGGC GTATCTTCCT GCAGCTGTGG
CACGTGGGCC GCATCTCCCA CCCCAGCTAC CTGAATGGCG AACTGCCGGT GGCTCCCAGC
GCGATCCAGG CCAAGGGCCA TGTCAGCCTG GTACGCCCAC TGAGTGACTA CCCCACCCCG
CGTGCGCTGG AAACCGAAGA AATCACTGAC ATCGTCGAGG CCTACCGCAG CGGCGCGGAA
AATGCCAAGG CGGCCGGCTT CGATGGTGTG GAGATCCACG GTGCCAACGG TTACCTGCTC
GACCAGTTCC TGCAAAGCAG CACCAACCAG CGCACCGACC GTTACGGCGG CTCACTGGAA
AACCGCGCGC GCCTGCTGCT GGAAGTGACC GATGCGGCCA TTGAAGTGTG GGGCGCGAAC
CGCGTGGGCG TGCACCTGGC GCCGCGTGCC GACGCCCACG ACATGGGCGA CGCCGACCGC
GCCGAAACCT TCACTTATGT GGCGCGCGAG CTGGGCAAGC GCGGCATCGC CTTCATCTGC
TCGCGGGAAC GGGAAGCCGA CGACAGCATT GGCCAACTGA TCAAAGAAGC GTTCGGCGGC
CCGTACATCG TCAACGAGCG GTTTGACAAA GCCAGTGCCA ATGCGGCCCT GGCCAGTGGC
AAGGCCGATG CGGTGGCGTT CGGCGTGCCG TTCATCGCCA ACCCCGACCT GCCGGCGCGG
CTGGCGGCGG ATGCGCCGTT GAATGACGCC CGGCCGGACA CTTTCTATAG CAAGGGGCCG
GTGGGGTATA TCGATTATCC GCGGTTGTAA
|
|---|
| Protein sequence | MTTLFDPITL GDLQLPNRII MAPLTRCRAD EGRVPNALMA EYYVQRASAG LILSEATSVS
AMGVGYPDTP GIWNDEQVRG WNNVTKAVHG AGGRIFLQLW HVGRISHPSY LNGELPVAPS
AIQAKGHVSL VRPLSDYPTP RALETEEITD IVEAYRSGAE NAKAAGFDGV EIHGANGYLL
DQFLQSSTNQ RTDRYGGSLE NRARLLLEVT DAAIEVWGAN RVGVHLAPRA DAHDMGDADR
AETFTYVARE LGKRGIAFIC SREREADDSI GQLIKEAFGG PYIVNERFDK ASANAALASG
KADAVAFGVP FIANPDLPAR LAADAPLNDA RPDTFYSKGP VGYIDYPRL
|
|---|
| |