Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4466 |
Symbol | |
ID | 5872274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4997984 |
End bp | 4998568 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641549601 |
Product | hypothetical protein |
Protein accession | YP_001670690 |
Protein GI | 167035459 |
COG category | [S] Function unknown |
COG ID | [COG3124] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.185967 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0340975 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTACC TCGCACACTT GCACCTGGGC GGCCCGGCGC CGCAACAACT GCTTGGCAGC CTGTATGGCG ACTTTGTCAA AGGCTCGCTG GAAGGGCGCT TTCCGCCTGC GCTGGAGGCG GCCATTCGGC TGCATCGGCA TATCGACAGC TACACCGATC GGCACCCGTT GGTATTGGCG GCGCTGGCGC GTTTTCCGCG TGAGCGGCGG CGCTTTGCCG GCATTGTCCT GGATGTGTTC TTCGACCATT GCCTGGCGCG ACATTGGCGT GATTATGCCG AGCAGCCACT GGCACAGTTC ACTGGGGCGT TTTACCGGGT GCTGCTGGCA GAGCCACAAC TGCCGGGGCG GCTGGCGCGG ATTGCACCGT TCATGGCGGC GGATGACTGG CTGGGGGCCT ATGGTGATTT CGCCACATTG GAGCAGGTGT TCAATGGCAT TGCTCGGCGC CTGTCACGCC CTGAAGGGAT GTCCGGGGTG ATGGGCGAGC TGGAGCGGCT GTATGAGCCA TTGCTGGCGG ACTTCAGGGC GTTTTATCCG CAGTTGCAGG CCTTTGCGGC GGCGGGGCGG TTGTCTGACA GTTAG
|
Protein sequence | MNYLAHLHLG GPAPQQLLGS LYGDFVKGSL EGRFPPALEA AIRLHRHIDS YTDRHPLVLA ALARFPRERR RFAGIVLDVF FDHCLARHWR DYAEQPLAQF TGAFYRVLLA EPQLPGRLAR IAPFMAADDW LGAYGDFATL EQVFNGIARR LSRPEGMSGV MGELERLYEP LLADFRAFYP QLQAFAAAGR LSDS
|
| |