| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4458 |
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| Symbol | |
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| ID | 5872266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4991465 |
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| End bp | 4992043 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549593 |
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| Product | PfpI family intracellular peptidase |
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| Protein accession | YP_001670682 |
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| Protein GI | 167035451 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.453472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00124261 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGCGA AGAAAATTCT CATGCTGGTG GGCGACTACG TTGAAGATTA TGAAGCGATG
GTGCCGTTTC AGGCCCTGAG CATGGTCGGC CACACAGTGC ATGCGGTGTG CCCGGAAAAG
CTGGCCGGGC AGACTGTGCG CACCGCGATT CATGACTTCG AGGGTGAGCA GACCTACAGC
GAAAAGCCTG GGCACAACTT TGCCCTGAAT TATGACTTCG TGCGGGTGCG GCCCGAAAGT
TACGACGCAT TGCTGATCCC GGGTGGCCGT GCGCCAGAGT ACCTGCGCCT GGATGAAAAG
GTGCTGGAGC TGGTGCGGGC GTTCGACCAG GCCGGCAAGC CGATTGCGGC GGTGTGCCAT
GGCGCTCAGC TGCTGGCGGC GGCCGGGGTG CTCGAGGGGC GTGAGTGCAG TGCGTACCCG
GCATGTGCGC CGGAAGTGCG ATTGGCGGGC GGTACGTTCA TCGATATCGC AGTGGACCAG
GCGCATGTGG ACGGCAACCT GGTCACTGCC CCCGCATGGC CAGCGCATCC GGCGTGGCTG
GCGGCCTTCC TCAAAGTGCT GGGTACCCGT ATCGCCTGA
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| Protein sequence | MTAKKILMLV GDYVEDYEAM VPFQALSMVG HTVHAVCPEK LAGQTVRTAI HDFEGEQTYS
EKPGHNFALN YDFVRVRPES YDALLIPGGR APEYLRLDEK VLELVRAFDQ AGKPIAAVCH
GAQLLAAAGV LEGRECSAYP ACAPEVRLAG GTFIDIAVDQ AHVDGNLVTA PAWPAHPAWL
AAFLKVLGTR IA
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