Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4442 |
Symbol | |
ID | 5872250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4974204 |
End bp | 4975679 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549577 |
Product | protein of unknown function DUF853 NPT hydrolase putative |
Protein accession | YP_001670666 |
Protein GI | 167035435 |
COG category | [R] General function prediction only |
COG ID | [COG0433] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.905304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0000193157 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGGAAT TTTCGACCAT CGTTGTAGGT GCTGGCCCGG ATGGCCAGCC AGTCGGGCAA GCAATGCGCC TGGCCAACCG CCACGGTCTG GTGGCGGGCG CAACCGGTAC AGGCAAGACC GTGACCCTGC AGCACCTGGC GGAAGTGTTC AGCGACGCCG GGGTGGCGGT GTTCGCTGCT GATGTCAAAG GTGACCTCTG CGGCCTGGGC GCAGCCGGTG CACCCCAGGG CAAGGTGGCC GAGCGCATCG CCGGCATGCC GTGGCTGGGG CATACGCCTC GGGCTTACCC GGTGAGCTTG TGGGACATTG CCGGGCAGTC CGGCCACCCG CTGCGCACCA CCCTCAGTGA AATGGGGCCG CTGCTGCTGG GCAACTTGCT GGAGCTGACC GACAGCCAGC AGGCGGCGCT GTATGCAGCC TTCAAGGTGG CTGACCGCGA AGGCCTGCTG CTGCTGGACC TCAAGGACCT CAAGGCTCTG CTTGCGCACC TGAAAGACAA CCCGCAACTG CTCGGCGAAG ACAGTGCGCT GATGACCACG GCCTCCACTC AGGCCTTGCT GCGCCGGCTC GCAACCCTTG AGCAGCAGGG AGCGGAGGCG CTGTTTGGTG AGCCGGCATT GCAGTTGGAG GACTTGCTGC GCCCGGACCC GGATGGCCGT GGCCGCATCC ACTTGCTCGA TGCCAGCCGG CTGGTGCACG AAGCACCCAA AGTGTATGCG ACGTTCCTGT TGTGGCTGCT GGCCGAGTTG TTCGAGCAGT TGCCCGAGCG CGGCGATGCC GACAAGCCGG TGCTGGCACT GTTCTTCGAT GAGGCGCACT TGCTGTTCAA CGGCACGCCC AAGGCATTGC AGGACCGTCT TGAGCAAGTG GTGCGGCTCA TCCGCTCCAA GGGCGTGGGG GTGTATTTCG TCACCCAGTC GCCAGGAGAC TTGCCCGACG CGGTGCTGGC CCAGCTAGGT TTGCGCATAC AACATGGTCT GCGGGCGTTT ACTGCCAAGG AGCAGAAGGC GCTGCGGGCT GTGGCCGATG GCTTCCGCCC CAATCCTGCG TTCGACACCC TGGCGGTGTT GACTGAGTTG GGGATTGGCG AGGCGCTGGT GGGCACGCTG GAAGAAAAGG GCACGCCGGC CATGGTGCAG CGGGTACTGG TTGCACCGCC GCAGTCACGT ATAGGGCCGC TGAGTGCAGT TGAGCGCAGT GCGTTGGTTG CGGCCTCGCC GTTGGCGGGG CGCTATGACA AGCCTGTGGA CCGTGAGTCG GCCTATGAGA TGCTGACCCA GCGCAAGGGC GAGGCGGTGG AACCGGCGCC GCAACCGAAG GCGGATGAGG AGAGCTTTAC CGACAAGGCC GGTGAGTTCT TGCAGAGTGC GGCGGGGCAG GCGATCAAGT CGGCGGTACG CCAGGCGGCC AACCAGTTGG GGCGGCAGTT GGTACGCGGG TTGATGGGGT CGTTGCTCGG CGGCAAGAAA AAGTGA
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Protein sequence | MSEFSTIVVG AGPDGQPVGQ AMRLANRHGL VAGATGTGKT VTLQHLAEVF SDAGVAVFAA DVKGDLCGLG AAGAPQGKVA ERIAGMPWLG HTPRAYPVSL WDIAGQSGHP LRTTLSEMGP LLLGNLLELT DSQQAALYAA FKVADREGLL LLDLKDLKAL LAHLKDNPQL LGEDSALMTT ASTQALLRRL ATLEQQGAEA LFGEPALQLE DLLRPDPDGR GRIHLLDASR LVHEAPKVYA TFLLWLLAEL FEQLPERGDA DKPVLALFFD EAHLLFNGTP KALQDRLEQV VRLIRSKGVG VYFVTQSPGD LPDAVLAQLG LRIQHGLRAF TAKEQKALRA VADGFRPNPA FDTLAVLTEL GIGEALVGTL EEKGTPAMVQ RVLVAPPQSR IGPLSAVERS ALVAASPLAG RYDKPVDRES AYEMLTQRKG EAVEPAPQPK ADEESFTDKA GEFLQSAAGQ AIKSAVRQAA NQLGRQLVRG LMGSLLGGKK K
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