| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4439 |
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| Symbol | |
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| ID | 5872247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4970770 |
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| End bp | 4971645 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549574 |
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| Product | IclR family transcriptional regulator |
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| Protein accession | YP_001670663 |
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| Protein GI | 167035432 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00103527 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGACG AAACCCTGGG CAACGATTCC GGCAATCCGG AGGCAGCACG ACCTGCTTCG
GCTGCCATGG CGCCGCCGAT CGTGGCCTCC CCGGCCAAGC GCATCCAGGC CTTTACCGGT
GATCCGGACT TCATGACCTC CCTGGCGCGT GGCCTGGCCG TGATCCAGGC GTTCCAGGAG
CGCAAACGCC ACCTGACCAT CGCCCAGATC AGCCACCGCA CCGAAATCCC CCGCGCAGCG
GTGCGCCGTT GCCTGCACAC GTTGATCAAG CTCGGTTATG CCACCACAGA CGGGCGTACC
TATTCGCTGC TGCCCAAAGT GCTGACCCTG GGGCATGCGT ACCTGTCGTC GACGCCGCTG
GCGATTTCTG CCCAACCCTA CCTGGACCGC ATCAGCGATC AGTTGCATGA GGCGGCCAAC
ATGGCCACCC TCGAAGGTGA CGACATCCTT TATATAGCGC GTTCGGCCAC GGTGGAGCGG
CTGATTTCGG TCGACCTGTC GGTGGGCGGT CGCTTGCCGG CGTATTGCAC GTCGATGGGG
CGCATTCTGC TGGCGGCCAT GGACGACACC AGCCTGCGTG AGTACCTGGA CCGTGCCGAC
CTGAAGGCGC GCACCAGTCG GACGCTGAAT GACCCAGAGT CATTGTTTGC CTGCATTCAG
CAGGTACGCG CCCAAGGGTG GTGCGTGGTG GACCAGGAGC TGGAGCAGGG GTTGCGCTCG
ATTGCCGTGC CGGTTTACGA CGCTTCGGGG CAAGTGTTGG CGGCATTGAA CGTGAGTACC
CATGTTGGCC GGGTGACGCG CAGCGAGCTG GAGCAGCGGT TCTTGCCGAT TCTGCTGGCG
GCCAGCCGCG ACCTTTGCCA TCAGTTGTTC GGGTGA
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| Protein sequence | MSDETLGNDS GNPEAARPAS AAMAPPIVAS PAKRIQAFTG DPDFMTSLAR GLAVIQAFQE
RKRHLTIAQI SHRTEIPRAA VRRCLHTLIK LGYATTDGRT YSLLPKVLTL GHAYLSSTPL
AISAQPYLDR ISDQLHEAAN MATLEGDDIL YIARSATVER LISVDLSVGG RLPAYCTSMG
RILLAAMDDT SLREYLDRAD LKARTSRTLN DPESLFACIQ QVRAQGWCVV DQELEQGLRS
IAVPVYDASG QVLAALNVST HVGRVTRSEL EQRFLPILLA ASRDLCHQLF G
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