| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4438 |
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| Symbol | |
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| ID | 5872246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4969102 |
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| End bp | 4970448 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549573 |
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| Product | benzoate transport |
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| Protein accession | YP_001670662 |
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| Protein GI | 167035431 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00260043 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCAAG CACAAACCAA CGTCGGCAAA AGCCTCGACG TTCAGTCGTT CATCAATCAG
CAGCCGCTGT CCCGCTATCA GTGGCGGGTC GTGCTGTTGT GCTTCCTGAT CGTTTTTCTC
GATGGCCTGG ACACCGCCGC CATGGGTTTC ATTGCCCCGG CCCTGTCGCA GGAGTGGGGG
ATCGATCGCG CCAGCCTCGG CCCGGTGATG AGTGCCGCAT TGATCGGGAT GGTGTTCGGC
GCCTTGGGCT CCGGGCCGCT GGCTGACCGT TTCGGCCGCA AAGGCGTGCT GGTGGGTGCT
GTGCTGGTGT TCGGTGGCTT CAGCCTGGCC TCGGCCTATG CCACCAACGT CGACCAACTG
CTGGTGTTGC GCTTCCTGAC AGGGCTGGGC CTGGGGGCAG GTATGCCCAA TGCCACCACG
TTGCTGTCCG AATACACCCC TGAACGCCTC AAGTCGTTGC TGGTGACCAG CATGTTCTGC
GGTTTCAACC TGGGCATGGC GGGTGGTGGC TTCATCTCCG CCAAGCTGAT CCCGGCCTAC
GGCTGGCACA GCCTGCTGGT GATCGGTGGC GTGTTGCCGT TGCTGCTGGC ACTGGTGTTG
ATGCTCTGGC TGCCGGAGTC GGCGCGGTTC CTGGTAGTAC GCAACCGAGG CACCGACAAG
GTGCGCAAGA CTTTGTCGCC GATTGCGCCG CACGTAGTGG CCGAGGCCGG CAGCTTCAGC
GTGCCGGAGC AAAAGGCGGT GGCTGCACGC AACGTGTTTG CGGTGATCTT CTCTGGCACC
TATGGGCTGG GCACCGTGCT GCTGTGGCTG ACCTATTTCA TGGGCCTGGT GATCGTCTAC
CTGCTGACCA GTTGGCTACC CACCCTGATG CGTGACAGCG GCGCGAGCAT GGAACAGGCC
GCGTTCATCG GCGCGCTGTT CCAGTTCGGT GGCGTGCTCA GTGCAGTTGG CGTGGGTTGG
GCCATGGACC GTTTCAACCC ACACAAGGTG ATCGGCATTT TCTACCTGCT GGCCGGGGTG
TTCGCCTACG CCGTGGGGCA GAGCCTGGGC AACATCACCT TGCTGGCCAC GCTGGTGCTG
ATCGCCGGCA TGTGCGTGAA CGGTGCACAG TCGGCGATGC CATCTTTGGC GGCACGCTTC
TACCCCACCC AGGGCCGGGC CACCGGTGTA TCGTGGATGC TGGGTATCGG CCGCTTTGGC
GCCATTCTGG GGGCCTGGAG CGGCGCGACG CTGCTGGGCC TGGGCTGGAA CTTCGAGCAA
GTGCTGACCG CACTGTTGGT GCCGGCGGCG CTGGCGGCCG TGGGTGTGAT CGTGAAGGGC
CTGGTGAGTC ACGCGGACGC GACGTGA
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| Protein sequence | MNQAQTNVGK SLDVQSFINQ QPLSRYQWRV VLLCFLIVFL DGLDTAAMGF IAPALSQEWG
IDRASLGPVM SAALIGMVFG ALGSGPLADR FGRKGVLVGA VLVFGGFSLA SAYATNVDQL
LVLRFLTGLG LGAGMPNATT LLSEYTPERL KSLLVTSMFC GFNLGMAGGG FISAKLIPAY
GWHSLLVIGG VLPLLLALVL MLWLPESARF LVVRNRGTDK VRKTLSPIAP HVVAEAGSFS
VPEQKAVAAR NVFAVIFSGT YGLGTVLLWL TYFMGLVIVY LLTSWLPTLM RDSGASMEQA
AFIGALFQFG GVLSAVGVGW AMDRFNPHKV IGIFYLLAGV FAYAVGQSLG NITLLATLVL
IAGMCVNGAQ SAMPSLAARF YPTQGRATGV SWMLGIGRFG AILGAWSGAT LLGLGWNFEQ
VLTALLVPAA LAAVGVIVKG LVSHADAT
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