| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4436 |
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| Symbol | |
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| ID | 5872244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4966148 |
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| End bp | 4967437 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641549571 |
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| Product | major facilitator superfamily metabolite/H(+) symporter |
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| Protein accession | YP_001670660 |
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| Protein GI | 167035429 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.939154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00699938 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCTCAA CCTATTACAC CGGCGAAGAA CGCAGCAAGC GCATCTTCGC CATTGTCGGT
GCCTCATCAG GCAACCTGGT GGAATGGTTC GACTTCTACG TCTACGCCTT TTGCGCGATC
TACTTCGCCC CGGCCTTCTT CCCCTCCGAT GACCCTACCG TGCAGCTGTT GAACACGGCA
GGCGTGTTCG CTGCAGGCTT TTTGATGCGC CCCATCGGTG GCTGGATCTT CGGCCGTCTC
GCTGACCGCC ACGGTCGCAA GAATTCCTTG ATGATCTCGG TGCTGATGAT GTGTTTCGGC
TCCTTGATGA TCGCTTGCCT GCCTACCTAT GCCAGCATCG GCACCTGGGC CCCGGCGCTG
CTGTTGCTGG CCCGCCTGAT CCAGGGCCTG TCGGTGGGTG GCGAATACGG CACCACCGCC
ACCTACATGA GTGAAGTGGC CCTGCGCGGC CAGCGCGGTT TCTTTGCTTC GTTCCAGTAC
GTCACCCTGA TTGGCGGCCA GTTGCTGGCG GTGCTGGTGG TGGTGATCCT GCAACAACTG
CTGACTGAAG ATGAACTGCG GGCCTGGGGC TGGCGCATCC CATTCGTGGT GGGCGCCATC
GCCGCGCTGA TCTCGCTGAT GCTGCGCCGC TCGCTGCACG AGACCAGCAG CGCCGAAACC
CGTAATGACA AGGATGCAGG TTCGATTGGT GGCCTGTTCC GCAACCACGC AGCGGCGTTC
ATCACGGTGC TGGGTTACAC CGCTGGCGGC TCGTTGATCT TCTACACCTT CACCACCTAC
ATGCAGAAGT ACCTGGTCAA CACTGCAGGC ATGACGGCGA AAAACGCCAG CTACGTGATG
ACCGGTGCGC TGTTCCTGTT CATGGTGCTG CAGCCGTTCT TCGGCATGTT GTCGGACCGC
ATCGGTCGGC GCAACTCGAT GCTGCTGTTC GGCGCTTTGG GTACCCTGTT CACCGTGCCA
TTGCTGATGG CGCTGAAAAC CGTGACCAGC CCGTTCATGG CCTTCGTTCT GATCAGCCTG
GCCTTGTGTA TCGTCAGTTT CTACACCTCC ATCAGCGGCC TGGTGAAGGC CGAGATGTTC
CCGCCGCAAG TACGCGCGCT GGGTGTGGGC CTGGCCTATG CGGTGGCCAA CGCGGCATTC
GGCGGTTCGG CCGAGTACGT GGCCTTGGGC CTGAAAACCC TGGGCATGGA AAACACCTTC
TACTGGTACG TGACGGCGAT GATGGCGATT GCCTTCCTGT TCAGCCTGCG CCTGCCGAAG
CAGGCGGCGT ACCTGCACCA TGATGATTAA
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| Protein sequence | MTSTYYTGEE RSKRIFAIVG ASSGNLVEWF DFYVYAFCAI YFAPAFFPSD DPTVQLLNTA
GVFAAGFLMR PIGGWIFGRL ADRHGRKNSL MISVLMMCFG SLMIACLPTY ASIGTWAPAL
LLLARLIQGL SVGGEYGTTA TYMSEVALRG QRGFFASFQY VTLIGGQLLA VLVVVILQQL
LTEDELRAWG WRIPFVVGAI AALISLMLRR SLHETSSAET RNDKDAGSIG GLFRNHAAAF
ITVLGYTAGG SLIFYTFTTY MQKYLVNTAG MTAKNASYVM TGALFLFMVL QPFFGMLSDR
IGRRNSMLLF GALGTLFTVP LLMALKTVTS PFMAFVLISL ALCIVSFYTS ISGLVKAEMF
PPQVRALGVG LAYAVANAAF GGSAEYVALG LKTLGMENTF YWYVTAMMAI AFLFSLRLPK
QAAYLHHDD
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