Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4432 |
Symbol | |
ID | 5872240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4963050 |
End bp | 4963562 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641549567 |
Product | hypothetical protein |
Protein accession | YP_001670656 |
Protein GI | 167035425 |
COG category | [S] Function unknown |
COG ID | [COG4539] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0824992 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0162853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACCC TCGTCGACCA CCTGAGCCAG TACGCCAGCT ACCACCGCGA CCCACGCAAC ATCATCACTC ACTTCATCGG TATCCCTATG ATCGTGCTGG CGGTCACCAT CCTGCTTTCA CGCCCAGGCT GGGAATTTGC CGGCATGTGG CTTTCCCCTG CCCTGCTGGC AGCGGCGGCA TCGGTATGGT TCTACCTGCG CCTGGACCTG CGCTTCGGCC TGGTGATGGG TGCATTGCTG GGGCTATGTC TGTGGGTCGG CCAGGTGCTG GCAGTGCAAA CGACTGCACT GTGGCTCAGC GCCGGGCTAG GGGCATTCGT GGTGGGTTGG ATCATCCAGT TCGTCGGCCA CTACTATGAA GGCCGCAAAC CGGCCTTCGT CGACGATGTC AGCGGCTTGA TCATCGGGCC GCTGTTCGTG GTGGCAGAAG CCGCGTTCAT GCTGGGCCTG TGCCCGGCCC TGAAACAGGC CGTAGAAAAC AACGCAGGCC CTGTTGTGAT GCGGTCTGTG TAG
|
Protein sequence | MKTLVDHLSQ YASYHRDPRN IITHFIGIPM IVLAVTILLS RPGWEFAGMW LSPALLAAAA SVWFYLRLDL RFGLVMGALL GLCLWVGQVL AVQTTALWLS AGLGAFVVGW IIQFVGHYYE GRKPAFVDDV SGLIIGPLFV VAEAAFMLGL CPALKQAVEN NAGPVVMRSV
|
| |