| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4425 |
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| Symbol | |
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| ID | 5872233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4952168 |
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| End bp | 4953619 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641549560 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001670649 |
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| Protein GI | 167035418 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.146647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.357206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGCTG CCCTGCCCCC CACCACCCTG CGCAACGTGC TCACTGCCCT GATGCTGGCC
ATCTTCCTCG GCGCACTGGA CCAGACCATC GTCGCCGTCT CGCTGCCGGC CATCTCGGCC
CAGTTCAACG ACGTCGGCCT GCTGGCCTGG GTGATCTCCG GGTACATGGT GGCAATGACC
GTGGCCGTAC CAATCTACGG CAAGCTGGGC GACCTTTACG GCCGGCGCCG GATGATCCTC
ACCGGGATCA GCTTGTTCAC CCTGGCCTCG ATTGCCTGTG CCATGGCCCA GGACATGCAG
CAGTTGGTGC TGGCCCGGGT ACTCCAGGGC ATTGGCGCGG GCGGTATGGT CTCGGTGAGC
CAGGCGATCA TCGGCGACTT CGTACCGCCG CGTGAACGCG GCCGCTACCA GGGCTATTTC
AGCAGCATGT ACGCCGTGGC CAGCGTCGCC GGGCCAGTGC TGGGCGGCTG GCTGACCGAG
TACTTGTCGT GGCGCTGGGT ATTCTGGATC AACCTGCCGC TGGGGCTGGT CGCCTTGTGG
GCCATACGCC GCGCCCTCGC CAGCATGCCG GTGCAGCGTC GCGAGGCCCA GGTCGACTAC
CTTGGCGCCG TGCTGTTGAT CCTCGGCCTT GGCAGCCTGC TGCTGGGGAT CACCTTGGTC
GGCCAGGGCC ACGCCTGGGC CGACCCGGCC GTGCTGGCGC TGTTCGCCTG CGCCCTACTC
GGCCTGGCGT TGTTCATCGC CCACGAGCGC CGCTGCCCAG AGCCGCTGCT GCCGCTCGGG
CTGTTCGGCA ACCGGGTGGC GGTACTTTGC TGGGGGGTGA TCTTCTTCGC CAGCTTCCAG
TCGATTTCCC TGACCATGCT CATGCCCTTG CGCTACCAGG GCATCACTGG CGCCGGTGCC
GACAGCGCTG CCCTGCACCT GCTGCCACTG GCCATGGGGT TGCCCATGGG GGCCTTTACA
GGCGGGCGCA TGACCAGCCG GACCGGGCGC TACAAGCCGC AGATCCTGGC CGGTGCGCTG
CTGATGCCAG TGGCCATTTT CGCCATGGCA CTGACGCCGC CGCAGTCAAC GTTGCTCAGT
GCACTGTTCA TGCTGCTGAC CGGCATTGCT TGCGGGCTGC AGTTTCCGAC CTCGCTGGTG
GGCACGCAAA GCGCGGTGGC CAGCAAGGAC ATTGGCGTGG CCACCAGCAC CACCAACCTG
TTCCGCTCGC TGGGCGGGGC CATGGGCGTG GCGTGCATGT CCAGCCTGTT GCTGGCACTG
CTGCACCAAG GTGGTTTCGA ATTGCTGGGT AACCCGTTGC TGGGGAGCCT GAAGGCCGGT
GAAGTGGACC TGGTGACACA GGGACGCTTG CTGGAGACAT TCCGGCAGTT GCTGATGGGC
AGCGCGCTGA TTGCGGTACT GGGGCTTTTT GCCGCATTGG CGTTGCCTGA CAGACAACTG
CGCGGGTACT AA
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| Protein sequence | MTAALPPTTL RNVLTALMLA IFLGALDQTI VAVSLPAISA QFNDVGLLAW VISGYMVAMT
VAVPIYGKLG DLYGRRRMIL TGISLFTLAS IACAMAQDMQ QLVLARVLQG IGAGGMVSVS
QAIIGDFVPP RERGRYQGYF SSMYAVASVA GPVLGGWLTE YLSWRWVFWI NLPLGLVALW
AIRRALASMP VQRREAQVDY LGAVLLILGL GSLLLGITLV GQGHAWADPA VLALFACALL
GLALFIAHER RCPEPLLPLG LFGNRVAVLC WGVIFFASFQ SISLTMLMPL RYQGITGAGA
DSAALHLLPL AMGLPMGAFT GGRMTSRTGR YKPQILAGAL LMPVAIFAMA LTPPQSTLLS
ALFMLLTGIA CGLQFPTSLV GTQSAVASKD IGVATSTTNL FRSLGGAMGV ACMSSLLLAL
LHQGGFELLG NPLLGSLKAG EVDLVTQGRL LETFRQLLMG SALIAVLGLF AALALPDRQL
RGY
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