| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4411 |
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| Symbol | |
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| ID | 5872219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4940031 |
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| End bp | 4941350 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549546 |
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| Product | major facilitator superfamily metabolite/H(+) symporter |
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| Protein accession | YP_001670635 |
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| Protein GI | 167035404 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACG CCACCTCCCT GCCCGCCGGG GCGGCCACCG CGCCTGCCGC AGAAAAAACC
ACCGCCAGCC GCCTGAAGTC GATTTTCAGC GGGTCCATCG GCAACATGGT CGAATGGTAC
GACTGGTACG TCTACGCCGC GTTCTCGCTG TACTTCGCCA AGGCCTTCTT CCCGGCCGGC
GACTCCACCG CACAACTGCT CAACACCGCC GCGATCTTCG CCGTGGGCTT TCTGATGCGC
CCGATCGGCG GCTGGCTGAT GGGCCTGTAC GCCGACCGCA AGGGCCGCAA GGCCGCGCTC
ATGGCTTCGG TACTGCTGAT GTGCGCAGGC TCGTTGGTCA TCGCCCTGAC CCCGGGTTAC
GAAACCATCG GCGTCGCCGC GCCTATCCTG CTGGTCATCG CACGCCTGCT GCAGGGCCTG
TCGGTAGGTG GTGAGTACGG CACCTCGGCC ACCTACCTCA GCGAAATGGC CAGCAAGGAA
CGCCGTGGCT TCTTCTCCAG CTTCCAGTAC GTGACCCTGA TCTCCGGCCA GCTCATCGCC
CTGGCGGTAT TGATCGTCCT GCAGCAGACC CTGACCACCG AGCAGCTGTA TGCCTGGGGC
TGGCGCGTGC CGTTCGTGAT CGGTGCGCTG TGCGCCGTAG TGGCCCTGTA CCTGCGTCGC
GGCATGGAAG AAACCGCATC GTTCACCAAG AAGGAAAAGG CCAAGGAAAG CCTGATGCGC
ACCCTACTGC GTCACCCCAA GGAGCTGATG ACAGTGGTCG GCCTGACCAT GGGCGGCACC
CTGGCCTTCT ACACCTACAC CACCTACATG CAGAAGTACC TGGTCAACAC CGTGGGCATG
AGCATCAGCG ACTCGACCAC CATCTCGGCC GCCACGCTGT TCCTGTTCAT GTGCCTGCAG
CCGGTGATCG GCGGGCTGTC CGACAAGATC GGCCGACGTC CGATCCTGAT CGCCTTCGGT
GTGCTCGGCA CCCTGTTCAC CGTACCGATC CTCAGCACCC TGCACACCAT CCAAACCTGG
TGGGGCGCGT TCTTCCTGAT CATGGCTGCT TTGATCATCG TCAGCGGCTA CACCTCGATC
AACGCCGTGG TCAAGGCCGA GCTGTTCCCA ACTGAAATTC GCGCACTGGG CGTAGGCCTG
CCATATGCGC TGACCGTGTC GATCTTCGGC GGTACCGCTG AGTACGTGGC CCTGTGGTTC
AAGAGCGTCG GCATGGAAAG CGGCTTCTAC TGGTACGTTA CCGCCTGCAT CGCTTGCTCG
CTGCTGGTTT ACGCAACCAT GAAGGACACC AAGCAACACT CGCGAATTAC TACTGATTGA
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| Protein sequence | MDNATSLPAG AATAPAAEKT TASRLKSIFS GSIGNMVEWY DWYVYAAFSL YFAKAFFPAG
DSTAQLLNTA AIFAVGFLMR PIGGWLMGLY ADRKGRKAAL MASVLLMCAG SLVIALTPGY
ETIGVAAPIL LVIARLLQGL SVGGEYGTSA TYLSEMASKE RRGFFSSFQY VTLISGQLIA
LAVLIVLQQT LTTEQLYAWG WRVPFVIGAL CAVVALYLRR GMEETASFTK KEKAKESLMR
TLLRHPKELM TVVGLTMGGT LAFYTYTTYM QKYLVNTVGM SISDSTTISA ATLFLFMCLQ
PVIGGLSDKI GRRPILIAFG VLGTLFTVPI LSTLHTIQTW WGAFFLIMAA LIIVSGYTSI
NAVVKAELFP TEIRALGVGL PYALTVSIFG GTAEYVALWF KSVGMESGFY WYVTACIACS
LLVYATMKDT KQHSRITTD
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