Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4410 |
Symbol | |
ID | 5872218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4938454 |
End bp | 4939788 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641549545 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001670634 |
Protein GI | 167035403 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAATT CGGTGATCGT CGTCGATGAT GAAGCCAGTA TCCGCACGGC TGTCGAGCAA TGGCTGAGCC TGTCCGGCTT CAGCGTGCAG TTGTTCGCCC GCGCCGAAGA GTGCCTGGCA CACCTGCCGC GGCACTTTCC CGGGGTGATC ATCAGCGATG TCCGCATGCC GGGCATGGAT GGCCTGCAAT TGCTCGAACG CCTGCAGGCG GATGACCCCG ACCTGCCCGT GATTTTGCTC ACCGGCCACG GTGATGTGCC CATGGCGGTA GAAGCCATGC GCAACGGGGC CTATGACTTC CTTGAAAAAC CCTTTACCCC GCAACACTTG CTGGGCAGCC TGCGCCGAGC CCTGGAGAAG CGCCAGCTGG TGCTGGAGAA CCGCCGGTTG CACGAGCAGG CCGACCTCAA GTCACGCCTG GAGGGGACGC TGCTTGGCAT GTCCCAAGGC CTGCAGCAGC TGCGCCGGCA AGTGCTGGAG CTGGCCAGCC TGCCGGTCAA TGTGCTGATT CGTGGTGAAA CCGGCAGTGG CAAGGAGCGT GTCGCCCGCT GCCTGCACGA TTTTGGCCCG CGCGCCGACA AGCCGTTCGT TGCCCTCAAC TGTGCAGCAA TCCCAGAGTC GCTGTTCGAG GCCGAGCTGT TCGGTCACGA GAGCGGCGCC TTTACCGGCG CCCAGGGCAA GCGCATCGGC AAGCTGGAGT ACGCCAACGG TGGCACGGTG TTCCTTGACG AAATCGAGAG CATGCCACTG GCGCAGCAGG CCAAGCTGCT ACGGGTGATT CAGGAACAGA AGGTGGAGCG CCTGGGGGCC AACCAGAGCA TCAGCGTCGA CTTGCGAATC ATTGCCGCGA CCAAGCCCGA CCTGCTCGAC GAAGCCCGTG CCGGGCGCTT TCGCGAAGAC CTGGCCTACC GCTTGAACGT GGCCGAGCTG CGCCTGGCAC CATTGCGTGA ACGGCGTGAG GACATCGCGC TGCTGTTCGA CCACTTTGCC CGTGCAGCAA GCGAAAAGCT TGGGCGTGCC GCGCCGCCGC CGTCGGGAGC ACAGCTGGCG CAACTGCTGT CGCATGACTG GCCGGGCAAT GTGCGTGAAC TGGCCAATGC GGCGGAGCGG CATGCATTGG GTTTGGGTTC GCCGAACATC GAGGTGGCGC CTGCCGGGCA ATCGCTGGGC GAGCAAATGG AAGCGTTCGA GGCGCAATGC CTACGCGCGG CGTTGCGCCA GCATGGTGGG GCGATCAATG CAGTGATGGA GGCGTTGCAG CTGCCGCGGC GCACACTGAA CGAGAAGATG CAGCGGCATG GTTTGGTACG TGAGGATTTT GTCGGGCGCG AATGA
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Protein sequence | MLNSVIVVDD EASIRTAVEQ WLSLSGFSVQ LFARAEECLA HLPRHFPGVI ISDVRMPGMD GLQLLERLQA DDPDLPVILL TGHGDVPMAV EAMRNGAYDF LEKPFTPQHL LGSLRRALEK RQLVLENRRL HEQADLKSRL EGTLLGMSQG LQQLRRQVLE LASLPVNVLI RGETGSGKER VARCLHDFGP RADKPFVALN CAAIPESLFE AELFGHESGA FTGAQGKRIG KLEYANGGTV FLDEIESMPL AQQAKLLRVI QEQKVERLGA NQSISVDLRI IAATKPDLLD EARAGRFRED LAYRLNVAEL RLAPLRERRE DIALLFDHFA RAASEKLGRA APPPSGAQLA QLLSHDWPGN VRELANAAER HALGLGSPNI EVAPAGQSLG EQMEAFEAQC LRAALRQHGG AINAVMEALQ LPRRTLNEKM QRHGLVREDF VGRE
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