Gene PputGB1_4410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4410 
Symbol 
ID5872218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4938454 
End bp4939788 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content64% 
IMG OID641549545 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001670634 
Protein GI167035403 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATT CGGTGATCGT CGTCGATGAT GAAGCCAGTA TCCGCACGGC TGTCGAGCAA 
TGGCTGAGCC TGTCCGGCTT CAGCGTGCAG TTGTTCGCCC GCGCCGAAGA GTGCCTGGCA
CACCTGCCGC GGCACTTTCC CGGGGTGATC ATCAGCGATG TCCGCATGCC GGGCATGGAT
GGCCTGCAAT TGCTCGAACG CCTGCAGGCG GATGACCCCG ACCTGCCCGT GATTTTGCTC
ACCGGCCACG GTGATGTGCC CATGGCGGTA GAAGCCATGC GCAACGGGGC CTATGACTTC
CTTGAAAAAC CCTTTACCCC GCAACACTTG CTGGGCAGCC TGCGCCGAGC CCTGGAGAAG
CGCCAGCTGG TGCTGGAGAA CCGCCGGTTG CACGAGCAGG CCGACCTCAA GTCACGCCTG
GAGGGGACGC TGCTTGGCAT GTCCCAAGGC CTGCAGCAGC TGCGCCGGCA AGTGCTGGAG
CTGGCCAGCC TGCCGGTCAA TGTGCTGATT CGTGGTGAAA CCGGCAGTGG CAAGGAGCGT
GTCGCCCGCT GCCTGCACGA TTTTGGCCCG CGCGCCGACA AGCCGTTCGT TGCCCTCAAC
TGTGCAGCAA TCCCAGAGTC GCTGTTCGAG GCCGAGCTGT TCGGTCACGA GAGCGGCGCC
TTTACCGGCG CCCAGGGCAA GCGCATCGGC AAGCTGGAGT ACGCCAACGG TGGCACGGTG
TTCCTTGACG AAATCGAGAG CATGCCACTG GCGCAGCAGG CCAAGCTGCT ACGGGTGATT
CAGGAACAGA AGGTGGAGCG CCTGGGGGCC AACCAGAGCA TCAGCGTCGA CTTGCGAATC
ATTGCCGCGA CCAAGCCCGA CCTGCTCGAC GAAGCCCGTG CCGGGCGCTT TCGCGAAGAC
CTGGCCTACC GCTTGAACGT GGCCGAGCTG CGCCTGGCAC CATTGCGTGA ACGGCGTGAG
GACATCGCGC TGCTGTTCGA CCACTTTGCC CGTGCAGCAA GCGAAAAGCT TGGGCGTGCC
GCGCCGCCGC CGTCGGGAGC ACAGCTGGCG CAACTGCTGT CGCATGACTG GCCGGGCAAT
GTGCGTGAAC TGGCCAATGC GGCGGAGCGG CATGCATTGG GTTTGGGTTC GCCGAACATC
GAGGTGGCGC CTGCCGGGCA ATCGCTGGGC GAGCAAATGG AAGCGTTCGA GGCGCAATGC
CTACGCGCGG CGTTGCGCCA GCATGGTGGG GCGATCAATG CAGTGATGGA GGCGTTGCAG
CTGCCGCGGC GCACACTGAA CGAGAAGATG CAGCGGCATG GTTTGGTACG TGAGGATTTT
GTCGGGCGCG AATGA
 
Protein sequence
MLNSVIVVDD EASIRTAVEQ WLSLSGFSVQ LFARAEECLA HLPRHFPGVI ISDVRMPGMD 
GLQLLERLQA DDPDLPVILL TGHGDVPMAV EAMRNGAYDF LEKPFTPQHL LGSLRRALEK
RQLVLENRRL HEQADLKSRL EGTLLGMSQG LQQLRRQVLE LASLPVNVLI RGETGSGKER
VARCLHDFGP RADKPFVALN CAAIPESLFE AELFGHESGA FTGAQGKRIG KLEYANGGTV
FLDEIESMPL AQQAKLLRVI QEQKVERLGA NQSISVDLRI IAATKPDLLD EARAGRFRED
LAYRLNVAEL RLAPLRERRE DIALLFDHFA RAASEKLGRA APPPSGAQLA QLLSHDWPGN
VRELANAAER HALGLGSPNI EVAPAGQSLG EQMEAFEAQC LRAALRQHGG AINAVMEALQ
LPRRTLNEKM QRHGLVREDF VGRE