| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4408 |
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| Symbol | |
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| ID | 5872216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4934326 |
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| End bp | 4936617 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549543 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001670632 |
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| Protein GI | 167035401 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.721312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAC TGTCTTTGCT GGGCCTGGCC ATGGGCCTTG CCAGTCAGGC GGCCCTCGCC
GCCCCCACCG CCCCGCCCCT GCAGGACAAG CAGGCATTCA TCGACCATCT GATCAGCCAG
ATGACCGAAG CCGAGAAAAT CGGACAGTTG CGCCTGATCA GCATCGGTCC AGAAATGCCC
CACGACAAGA TTCGCGAGGA AATCGCCGCC GGCCGCATCG GTGGCACTTT CAACTCACGC
ACCGCCCCGG AAAACAGGCC GATGCAAGAC GCCGCCATGC GCAGTCGCCT GAAGATCCCG
ATGTTCTTCG CCTACGACAC CATCCACGGC GAACGCACCA TCTTCCCGAT CGGCCTGGGC
ATGGCTGCCA CCTGGGACAT GGACGCGGTT GCCAAGGTCG GTCGCACCGC CGCTATCGAA
GCCTCGGCCG ACGCCTTGGA CATGACCTTC GCACCGATGG TCGATATCGC CCGTGACCCG
CGCTGGGGCC GCACCAGTGA AGGCTTCGGC GAAGACACCT ACCTGACCTC GAAAATCGGC
CAGGTGATGG TGCGCTCGTT CCAGGGCAGC AGCCCGGCCA ACCCCGACAG CATCATGGCC
ATCGTCAAGC ACTTCGCCCT GTATGGCGCG GTGGAAGGCG GGCGCGACTA CAACACAGTC
GATATGAGCC TGCCGAAAAT GTACAACGAC TACCTGCCGC CCTACCGCGC CGCACTCGAT
GCAGGTGCCG GCGGGGTGAT GGTGGCGCTG AACTCGATCA ATGGCGTGCC AGCCACCTCC
AACACCTGGC TGATGAACGA CCTGCTGCGC AAGGAGTGGG GCTTCAAGGG CGTGACCATC
AGCGACCACG GTGCAATCCA GGAGTTGATC CGCCACGGCG TCGCCCGCGA CGGCCGTGAA
GCCGCCAAGC TGGCGATCAA GGCCGGCATC GACATGAGCA TGAACGACAC CCTGTACGGC
GAAGAGCTGC CGGGCTTGCT GAAGTCTGGC GAAGTGACCC AGCGCGAGCT GGACCAGGCG
GTGCGTGAAG TGCTGGGTGC CAAGTACGAC ATGGGCCTGT TCAAAGACCC GTACGTGCGT
ATCGGCAAGG CCGAAACCGA CCTGAAAGAC TACTACGGCA ACGACCGCCT GCACCGCGAA
GCCGCGCGTG ACGTGGCCCG CCGCAGCCTG GTGCTGCTGG AAAACCGCAA CCAGACCCTG
CCACTGAAAA AAGCCGGCAC CATTGCCTTG GTCGGCCCGC TGGCCGATGC CCCGATCGAC
ATGATGGGCA GCTGGGCCGC CGACGGAAAA CCCGTGCACT CGGTGACCGT TCGCGAAGGC
TTGCGCCGTG CCATGGAGGG CAAGGCCAAG CTGGTCTATG CCAAAGGCTC CAACGTCACG
GGCGACAAGG CGATCCTCGA TTACCTGAAC TTCCTCAACT TCGATGCCCC GGAAATCGTC
GACGACCCAC GTCCGCCTGC GGTGCTGATC GATGAAGCGG TCAAGGCGGC CAAGCAGTCC
GATGTGATCG TGGCAGTGGT CGGCGAGTCG CGCGGCATGT CCCACGAGTC GTCGAGCCGT
ACCACCCTGG AAATCCCGGC CAGCCAGCGC GAGCTGATCA AGGCCCTCAA GGCAACCGGT
AAACCACTGG TGCTGGTGCT GATGAACGGC CGCCCGCTGT CGATCAGCTG GGAACGCGAG
CAGGCCGACG CGATCCTCGA AACCTGGTTC GCCGGCACCG AAGGCGGCAA TGCCATCGCC
GACGTACTGT TTGGCGATTA CAACCCCTCT GGCAAGCTGG CCATCACCTT CCCGCGCTCG
GTCGGGCAAA TCCCGATGTA CTACAACCAC ACCCGTATCG GCCGGCCATT CACGCCGGGC
AAGCCGGGCA ACTACACCTC GCAGTACTTC GAAGAGCCCA ACGGGCCGCT GTACCCGTTC
GGCTATGGCC TGAGCTACAG CAGCTTCGAG TTGTCGGGCC TGGCGCTGTC GAGCAAAGAC
CTCAAGCGCG GCGATACGCT GGAAGCCAAG GTAACGGTCA AGAACACCGG CAAGGTGGCA
GGCGAGACGG TGGTGCAGCT GTACCTGCAG GATGTGTCCG CCTCGATGAG CCGCCCGGTG
AAGGAGCTGA AAAACTTCCA GAAGCTTATG CTCAAGCCTG GCGAGACGCG CACATTGACC
TTCAGCATCA GCGAGGACGA CCTGAAGTTC TACAATGGCC AGCTACAGCG GGTTGCCGAG
CCCGGGGAAT TCAATGTCCA GGTCGGGCTG GATTCCCAGG CGGTGCAGCA ACAGAGTTTC
GAGCTGCTGT AA
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| Protein sequence | MMKLSLLGLA MGLASQAALA APTAPPLQDK QAFIDHLISQ MTEAEKIGQL RLISIGPEMP
HDKIREEIAA GRIGGTFNSR TAPENRPMQD AAMRSRLKIP MFFAYDTIHG ERTIFPIGLG
MAATWDMDAV AKVGRTAAIE ASADALDMTF APMVDIARDP RWGRTSEGFG EDTYLTSKIG
QVMVRSFQGS SPANPDSIMA IVKHFALYGA VEGGRDYNTV DMSLPKMYND YLPPYRAALD
AGAGGVMVAL NSINGVPATS NTWLMNDLLR KEWGFKGVTI SDHGAIQELI RHGVARDGRE
AAKLAIKAGI DMSMNDTLYG EELPGLLKSG EVTQRELDQA VREVLGAKYD MGLFKDPYVR
IGKAETDLKD YYGNDRLHRE AARDVARRSL VLLENRNQTL PLKKAGTIAL VGPLADAPID
MMGSWAADGK PVHSVTVREG LRRAMEGKAK LVYAKGSNVT GDKAILDYLN FLNFDAPEIV
DDPRPPAVLI DEAVKAAKQS DVIVAVVGES RGMSHESSSR TTLEIPASQR ELIKALKATG
KPLVLVLMNG RPLSISWERE QADAILETWF AGTEGGNAIA DVLFGDYNPS GKLAITFPRS
VGQIPMYYNH TRIGRPFTPG KPGNYTSQYF EEPNGPLYPF GYGLSYSSFE LSGLALSSKD
LKRGDTLEAK VTVKNTGKVA GETVVQLYLQ DVSASMSRPV KELKNFQKLM LKPGETRTLT
FSISEDDLKF YNGQLQRVAE PGEFNVQVGL DSQAVQQQSF ELL
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