Gene PputGB1_4393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4393 
Symbol 
ID5872200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4918433 
End bp4919413 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content62% 
IMG OID641549527 
Producthypothetical protein 
Protein accessionYP_001670617 
Protein GI167035386 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.620266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTTT CACTGCGCCG CCTCGTCCTC GCAACCGGTT GCCTGCTGTT GGCCGGCAAC 
GCCCTCGCTG CAGAACCCAA ACGCCCCGAA TGCATCGCCC CCGCCTCACC CGGCGGAGGC
TTCGACCTGA CCTGCAAACT GGTGCAAAGC GCCCTGGTGC AGGAAAAGAT CCTCAGCAAG
CCCATGCGCG TCACCTACAT GCCCGGCGGT GTCGGCGCGG TGGCCTACAA CGCCGTGGTC
GCCCAGCGCC CAGCCGACGC CGGCACTTTG GTGGCCTGGT CCAGCGGCTC GCTGCTGAAC
CTGGCCCAAG GCAAGTTCGG CCGCTTCGAC GAAAACGCGG TGAAATGGTT GGCTGCTGTC
GGCACCAGCT ACGGTGCCAT TGCGGTGAAA AGCGATTCGC CTTACAAAAC CCTCGATGAC
CTGGTCGCGG CACTGAAGAA AGACCCAAGC AAGGTGGTGA TCGGCTCGGG CGGTACGGTC
GGCAGCCAGG ACTGGATGCA GACTGCGCTT ATCGCCAAGG CCGCCGGCAT CAACCCGCGT
GACCTGCGCT ACGTGGCCCT GGAAGGCGGT GGCGAAATTG CCACGGCGCT GCTGGGCGGC
CATATCCAGG TCGGCTCTAC CGACATCTCC GACTCCATGC CGCACATCCA AAGCGGCAAC
ATGCGCATCC TCGCGGTGTT CTCGGAAAAC CGCCTGGACG AGCCGGAAAT GAAAAACATC
CCTACCGCCA AGGAGCAAGG CTACGACATC GTCTGGCCGG TGGTGCGCGG CTTCTACCTG
GGGCCGAAAG TGAGCGACGA AGACTACGCC TGGTGGAAGG CTTCGTTCGA CAAGATGCTG
GCCTCGGAAG ACTTCGCCCA GCTGCGTGAT CAACGTGAGC TGTTCCCGTT CGCCATGACC
GGTGAAGAGC TGGACGGCTA TGTGAAAAAG CAAGTGGCCG ACTACAAGGC ACTGGCCAAG
GAATTTGGCC TGATTCAGTA A
 
Protein sequence
MTFSLRRLVL ATGCLLLAGN ALAAEPKRPE CIAPASPGGG FDLTCKLVQS ALVQEKILSK 
PMRVTYMPGG VGAVAYNAVV AQRPADAGTL VAWSSGSLLN LAQGKFGRFD ENAVKWLAAV
GTSYGAIAVK SDSPYKTLDD LVAALKKDPS KVVIGSGGTV GSQDWMQTAL IAKAAGINPR
DLRYVALEGG GEIATALLGG HIQVGSTDIS DSMPHIQSGN MRILAVFSEN RLDEPEMKNI
PTAKEQGYDI VWPVVRGFYL GPKVSDEDYA WWKASFDKML ASEDFAQLRD QRELFPFAMT
GEELDGYVKK QVADYKALAK EFGLIQ