Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4393 |
Symbol | |
ID | 5872200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4918433 |
End bp | 4919413 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641549527 |
Product | hypothetical protein |
Protein accession | YP_001670617 |
Protein GI | 167035386 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.620266 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTTT CACTGCGCCG CCTCGTCCTC GCAACCGGTT GCCTGCTGTT GGCCGGCAAC GCCCTCGCTG CAGAACCCAA ACGCCCCGAA TGCATCGCCC CCGCCTCACC CGGCGGAGGC TTCGACCTGA CCTGCAAACT GGTGCAAAGC GCCCTGGTGC AGGAAAAGAT CCTCAGCAAG CCCATGCGCG TCACCTACAT GCCCGGCGGT GTCGGCGCGG TGGCCTACAA CGCCGTGGTC GCCCAGCGCC CAGCCGACGC CGGCACTTTG GTGGCCTGGT CCAGCGGCTC GCTGCTGAAC CTGGCCCAAG GCAAGTTCGG CCGCTTCGAC GAAAACGCGG TGAAATGGTT GGCTGCTGTC GGCACCAGCT ACGGTGCCAT TGCGGTGAAA AGCGATTCGC CTTACAAAAC CCTCGATGAC CTGGTCGCGG CACTGAAGAA AGACCCAAGC AAGGTGGTGA TCGGCTCGGG CGGTACGGTC GGCAGCCAGG ACTGGATGCA GACTGCGCTT ATCGCCAAGG CCGCCGGCAT CAACCCGCGT GACCTGCGCT ACGTGGCCCT GGAAGGCGGT GGCGAAATTG CCACGGCGCT GCTGGGCGGC CATATCCAGG TCGGCTCTAC CGACATCTCC GACTCCATGC CGCACATCCA AAGCGGCAAC ATGCGCATCC TCGCGGTGTT CTCGGAAAAC CGCCTGGACG AGCCGGAAAT GAAAAACATC CCTACCGCCA AGGAGCAAGG CTACGACATC GTCTGGCCGG TGGTGCGCGG CTTCTACCTG GGGCCGAAAG TGAGCGACGA AGACTACGCC TGGTGGAAGG CTTCGTTCGA CAAGATGCTG GCCTCGGAAG ACTTCGCCCA GCTGCGTGAT CAACGTGAGC TGTTCCCGTT CGCCATGACC GGTGAAGAGC TGGACGGCTA TGTGAAAAAG CAAGTGGCCG ACTACAAGGC ACTGGCCAAG GAATTTGGCC TGATTCAGTA A
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Protein sequence | MTFSLRRLVL ATGCLLLAGN ALAAEPKRPE CIAPASPGGG FDLTCKLVQS ALVQEKILSK PMRVTYMPGG VGAVAYNAVV AQRPADAGTL VAWSSGSLLN LAQGKFGRFD ENAVKWLAAV GTSYGAIAVK SDSPYKTLDD LVAALKKDPS KVVIGSGGTV GSQDWMQTAL IAKAAGINPR DLRYVALEGG GEIATALLGG HIQVGSTDIS DSMPHIQSGN MRILAVFSEN RLDEPEMKNI PTAKEQGYDI VWPVVRGFYL GPKVSDEDYA WWKASFDKML ASEDFAQLRD QRELFPFAMT GEELDGYVKK QVADYKALAK EFGLIQ
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