Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4391 |
Symbol | |
ID | 5872198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4916225 |
End bp | 4916896 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549525 |
Product | two component transcriptional regulator |
Protein accession | YP_001670615 |
Protein GI | 167035384 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTAC TGCTGGTCGA AGACCACCTG CAACTGGCCG AAAGCGTGGC CCTGGCCTTG AAAAGCCACG GCCTGACCGT GGATGTGCTG CATGATGGCG TGGCTGCCGA CCTGGCCCTG GCCAGCGAGG AATACGCTGT GGCCGTGCTG GATGTCGGCT TGCCGCGCAT GGACGGCTTC GAGGTGCTGG CGCGTCTGCG CGGCCGTGGC AAGACCTTGC CAGTGCTGAT GCTGACCGCG CGCAGCGACG TCAAGGACCG TGTTCATGGC CTGAACCTTG GCGCCGACGA TTACCTGGCC AAGCCGTTCG AGCTCACTGA GCTGGAAGCA AGGGTCAAGG CCTTGCTGCG CCGCAGCGTG CTCGGTGGCG AGCGCCAGCA GCGTTGCGGG CCGCTGGTCT ATGACCTGGA CACCCGGCGC TTTACCCTCG GTGCAGATAA CCTGACCCTC ACCTCGCGCG AGCAAAGCGT GCTGGAAGCG CTGATCGCCC GGCCGGGCCG GGTGATGAGC AAGGAGCAAC TGGCTGCCCA GGTGTTCGGC CTGGACGAAG AGGCCAGCCC CGACGCCATC GAAATCTACA TCCACCGGCT GCGCAAGAAG CTCGACGGCC ACCCGGTGGC TATCGTTACT TTCCGTGGCC TTGGCTACCT GCTCGAGCAC CGCGATGCGT GA
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Protein sequence | MRVLLVEDHL QLAESVALAL KSHGLTVDVL HDGVAADLAL ASEEYAVAVL DVGLPRMDGF EVLARLRGRG KTLPVLMLTA RSDVKDRVHG LNLGADDYLA KPFELTELEA RVKALLRRSV LGGERQQRCG PLVYDLDTRR FTLGADNLTL TSREQSVLEA LIARPGRVMS KEQLAAQVFG LDEEASPDAI EIYIHRLRKK LDGHPVAIVT FRGLGYLLEH RDA
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