| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4381 |
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| Symbol | |
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| ID | 5872188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4906380 |
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| End bp | 4907987 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549515 |
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| Product | L-aspartate oxidase |
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| Protein accession | YP_001670605 |
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| Protein GI | 167035374 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.20561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAC AATTCCAACA TGATGTCCTG GTGATCGGCA GCGGTGCCGC CGGTCTCAGC
CTGGCACTTA ACCTCCCCAG CCACCTACGC GTTGCCGTGC TCAGCAAGGG CGACCTGGCC
AACGGCTCGA CCTTCTGGGC CCAAGGCGGC GTCGCGGCGG TGCTGGACAA CACTGACACC
GTCCAGTCGC ATGTCGAAGA CACCCTCAAT GCTGGCGGCG GCCTTTGCCA TGAAGAAGCG
GTGCGTTTTA CCGTCGAGCA CAGCCGTGAA GCCATCCAGT GGTTGATCGA GCAAGGCGTG
CCCTTCACCC GCGACGAGCA CTACAGCGTC GATGATGGCG GCTTCGAGTT CCACCTCACC
CGTGAAGGCG GCCATAGCCA CCGGCGCATC ATCCATGCCG CCGACGCCAC TGGCGCGGCC
ATTTTCACCA CGCTGCTGGA GCAGGCTCGC CAGCGCCCGA ATATCCAGCT GCTGGAGCAG
CGCGTGGCGG TCGACCTGAT TACCGAACGT CGCCTGGGCC TGCCCGGCGA ACGCTGCCTT
GGCGCCTACG TGCTCGACCG CAACACCGGT GAGGTAGACA CCTTTGGTGC GCGCTTCACC
GTGCTGGCCA CTGGCGGTGC GGCCAAGGTC TATCTCTATA CCAGCAACCC CGACGGCGCC
TGTGGCGACG GCATCGCCAT GGCCTGGCGA GCCGGTTGTC GGGTGGCGAA CCTGGAATTC
AACCAGTTCC ACCCGACCTG CCTGTACCAC CCACAGGCCA AGAGCTTCCT GGTCACCGAA
GCCCTGCGCG GCGAGGGCGC CCTGTTGCGC CTGCCCAACG GCGAACGCTT CATGCCACGC
TTCGACCCAC GCGAAGAGCT GGCCCCCCGC GACATCGTGG CCCGCGCCAT CGACCACGAA
ATGAAGCGCC TGGGCGTGGA CTGCGTCTAC CTGGACATCA CTCACAAGCC AGCCGATTTC
ATCAAGAGCC ACTTCCCTAC CGTATACGAG CGCTGCCTGG CCTTTGGCAT CGACATCACT
CGTCAGCCCA TCCCGGTGGT ACCTGCTGCG CACTACACCT GCGGCGGGGT GATGGTCGAC
GACCGCGGCC ATACCGACGT GCCAGGTTTG TATGCCATCG GTGAAACCAG CTTCACCGGC
CTTCACGGCG CCAACCGCAT GGCGAGCAAC TCGCTGCTGG AATGCTTCGT CTATGGCCGC
GCTGCCGCCG CTGACATCCA GGCAAATCTG GAGCAAGTGC CCATGCCCAA AGCGCTGCCC
GGTTGGGATG CCAGCCAGGT CACCGACTCG GACGAAGACG TGATCATTGC GCACAACTGG
GACGAATTGC GGCGGTTCAT GTGGGACTAC GTGGGCATTG TGCGCACCAG CAAGCGCCTG
CAGCGGGCCC AGCACCGCAT TCGGCTGCTG CTGGATGAAA TCGACGAGTT CTACAGCAAC
TATCGCGTAA GCAGAGACCT GATTGAATTG AGGAACCTTG CTCAAGTAGC GGAACTGATG
ATCAGGTCTG CCATGAAACG TAAGGAATCT CGGGGTCTGC ACTACACGTT GGACTATCCA
GAGCTGCTGC CAGAGGCGAA GGATACGATC CTTACACCCG ACAAATGA
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| Protein sequence | MSQQFQHDVL VIGSGAAGLS LALNLPSHLR VAVLSKGDLA NGSTFWAQGG VAAVLDNTDT
VQSHVEDTLN AGGGLCHEEA VRFTVEHSRE AIQWLIEQGV PFTRDEHYSV DDGGFEFHLT
REGGHSHRRI IHAADATGAA IFTTLLEQAR QRPNIQLLEQ RVAVDLITER RLGLPGERCL
GAYVLDRNTG EVDTFGARFT VLATGGAAKV YLYTSNPDGA CGDGIAMAWR AGCRVANLEF
NQFHPTCLYH PQAKSFLVTE ALRGEGALLR LPNGERFMPR FDPREELAPR DIVARAIDHE
MKRLGVDCVY LDITHKPADF IKSHFPTVYE RCLAFGIDIT RQPIPVVPAA HYTCGGVMVD
DRGHTDVPGL YAIGETSFTG LHGANRMASN SLLECFVYGR AAAADIQANL EQVPMPKALP
GWDASQVTDS DEDVIIAHNW DELRRFMWDY VGIVRTSKRL QRAQHRIRLL LDEIDEFYSN
YRVSRDLIEL RNLAQVAELM IRSAMKRKES RGLHYTLDYP ELLPEAKDTI LTPDK
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