| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4377 |
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| Symbol | |
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| ID | 5872184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4902153 |
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| End bp | 4903586 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549511 |
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| Product | protease Do |
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| Protein accession | YP_001670601 |
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| Protein GI | 167035370 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.937074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.327825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATAC CACGCTTGAA ATCCTACCTA ACGATGTTCG CCGCCGTGCT CATGCTCGGC
CAGGTGCTCA CCGCCCAGGC CGAGGAAGCC CTGCCGGACT TCACCAGCCT GGTCGAGCAG
GCCTCGCCGG CGGTGGTCAA CATCAGTACC AAGCAGAAGC TGCCGGATCG CCGCATCGCT
GCAGGGCAGA TGCCGGACCT GGAAGGCCTG CCGCCGATGT TCCGCGAGTT CTTCGAACGC
AACATGCCGC AACAACCGCG CTCGCCACGC GGTGACCGCC AGCGCGAGGC GCAGTCGCTG
GGCTCGGGCT TCATCATTTC CAGTGATGGC TACGTGCTCA CCAACAACCA CGTGGTCGCC
GACGCCGACG AGATCATCGT CCGCCTGTCG GACCGCAGCG AGCTGCAGGC CAAATTGGTC
GGCACCGACC CGCGTACCGA CGTGGCCCTG CTGAAGGTCG AGGGCAAGAA CCTGCCGATC
GTGAAGCTGG GTGATTCCGA GAAGCTCAAG GTGGGTGAGT GGGTACTGGC CATCGGTTCG
CCGTTCGGCT TCGACCATTC GGTGACCAAA GGTATCGTCA GCGCCAAGGG CCGGACCCTG
CCCAATGACA CCTACGTACC GTTCATCCAG ACCGACGTGG CCATCAACCC GGGTAACTCC
GGTGGTCCGC TGTTCAACAT GAAGGGCGAA GTGGTGGGTA TCAACTCGCA GATCTTCACC
CGTTCTGGCG GTTTCATGGG CTTGTCGTTC GCCATCCCGA TCGATGTGGC GATCGATGTC
TCCAACCAGC TGAAAAAAGA CGGCAAGGTC AGCCGTGGCT GGCTGGGTGT AGTGATTCAG
GAGGTCAACA AGGACCTGGC TGAATCCTTC GGCCTGGACA AGCCTGCGGG TGCCCTGGTG
GCCCAGGTAT TGGAAAACGG CCCGGCTGCC AAGGGCGGCC TGCAGGTGGG TGACGTGATC
CTCAGCATGA ACGGCCAGCC TATCGTCATG TCGGCCGACC TGCCGCACCT GGTTGGCGGC
CTCAAGGATG GCGAGAAGGC CAAGCTGGAA ATCATCCGCA ACGGCAAGCG TCAGAACCTG
GACATCAGCG TGGGCGCACT GCCGGACGAC GATGCCGACA TTGGCACTGG CGCCGAAGGC
AGCGCCGAGC GCAGCAGCAA CCGCCTGGGC GTATCGGTGG CCGACCTGAC CGCCGAGCAG
AAGAAATCCC TGGAGCTCAA GGGAGGCGTG GTCATCAAGG AAGTGCAGGA TGGCCCCGCA
GCCATGATTG GCCTGCGCCC GGGTGATGTC ATCAGCCACC TGAACAACCA GGCCATCGGT
TCGGCCAAGG AATTCACCGA AATCGCCAAG GAGCTGCCGA AGAACCGTTC GGTATCGATG
CGCGTCCTGC GTCAGGGGCG CGCCAGCTTC ATCACCTTCA AGCTTGCTGA ATAA
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| Protein sequence | MSIPRLKSYL TMFAAVLMLG QVLTAQAEEA LPDFTSLVEQ ASPAVVNIST KQKLPDRRIA
AGQMPDLEGL PPMFREFFER NMPQQPRSPR GDRQREAQSL GSGFIISSDG YVLTNNHVVA
DADEIIVRLS DRSELQAKLV GTDPRTDVAL LKVEGKNLPI VKLGDSEKLK VGEWVLAIGS
PFGFDHSVTK GIVSAKGRTL PNDTYVPFIQ TDVAINPGNS GGPLFNMKGE VVGINSQIFT
RSGGFMGLSF AIPIDVAIDV SNQLKKDGKV SRGWLGVVIQ EVNKDLAESF GLDKPAGALV
AQVLENGPAA KGGLQVGDVI LSMNGQPIVM SADLPHLVGG LKDGEKAKLE IIRNGKRQNL
DISVGALPDD DADIGTGAEG SAERSSNRLG VSVADLTAEQ KKSLELKGGV VIKEVQDGPA
AMIGLRPGDV ISHLNNQAIG SAKEFTEIAK ELPKNRSVSM RVLRQGRASF ITFKLAE
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