| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4362 |
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| Symbol | |
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| ID | 5872169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4886408 |
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| End bp | 4888825 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549496 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001670586 |
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| Protein GI | 167035355 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.304845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0378199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC AGCAGGATTT CCCGGAACAC CCCGACGAAC ACAGCGAAGT CGAACACACC
ACCCAGGCCG ATACCAGCCA CGCCCTCGCC CTGCCCGGCC AGCAACTGCC GGACAAGGTC
TATGTGATCC CGATCCACAA CCGCCCGTTC TTCCCGGCCC AGGTACTGCC GGTCATCGTC
AACGAAGAAC CCTGGGCCGA AACCCTCGAC CTGGTCGCCA AGTCACCGGA CCACTGCCTG
GCGCTGTTCT TCATGGACAC CCCGCCAGAA GACCACCGTC ACTTCGACAC CTCGGCGCTG
CCGCAGTACG GCACGCTGGT CAAGGTGCAC CATGCCAGCC GCGAAAACGG CAAGCTGCAG
TTCGTCGCCC AGGGCCTGAC GCGGGTACGC ATCCGCACCT GGCTCAAGCA CCATCGCCCG
CCCTACCTGG TCGAAGTCGA ATACCCACGC CAGCCCACCG AGCCGACCGA CGAGGTCAAG
GCCTACGGTA TGGCACTGAT CAATGCGATC AAAGAATTGC TACCGCTCAA TCCGCTCTAC
AGCGAAGAGC TCAAGAACTA CCTCAACCGC TTCAGCCCCA ATGACCCCTC ACCCCTCACC
GACTTCGCCG CGGCACTGAC CTCTGCCACT GGCAGCCAGC TGCAAGAAGT GCTCGACTGC
GTACCCATGC TCAAACGCAT GGAAAAGGTC CTGCCGATGT TGCGCAAGGA AGTGGAAGTC
GCACGCCTGC AGAACGAGAT CTCGGCCGAG GTCAATCGGC AGATCGGCGA GCACCAGCGC
GAATTCTTCC TCAAGGAACA GCTCAAGGTC ATCCAGCAGG AGCTGGGCCT GACCAAGGAC
GACCGCAGCG CCGACCTCGA ACAGTTCGAG CAACGCCTGG AGGGCAAGAC ACTGCCGGCC
CAGGCGCGCA AGCGCATCGA CGAAGAGATG GGCAAACTGG CCATCCTCGA AACCGGCTCG
CCCGAATACG CCGTCACCCG CAACTACCTC GAGTGGGCCA CCGCCCTGCC GTGGGGCGTG
TACGGCAAGG ACAAGCTCGA CCTCAAGCAT GCGCGTAAAG TGCTCGACCA GTACCACGCC
GGCCTGGACG ACATCAAGGA GCGCATCCTC GAGTTCCTCG CCGTGGGCGC CTGGAAAGGC
GAAATCAGCG GCTCGATCGT GCTGCTGGTG GGCCCGCCCG GTGTGGGCAA GACCAGTATC
GGCAAATCCA TCGCCGAGTC GCTCGGGCGG CCGTTCTACC GTTTCAGCGT TGGCGGCATG
CGTGACGAAG CCGAAATCAA GGGCCATCGC CGCACCTACA TCGGCGCCCA GCCCGGCAAG
CTGGTGCAGG CCCTGAAAGA CGTCGAAGTG ATGAACCCGG TGATCATGCT CGACGAGATC
GACAAGATGG GCCAGAGCTA CCAGGGCGAC CCGGCTTCGG CCTTGTTGGA AACCCTCGAC
CCGGAGCAGA ACGTCGACTT CCTCGACCAC TATCTCGACC TGCGCCTGGA CCTGTCCAAG
GTGCTGTTCG TGTGCACCGC CAACACCCTC GACTCGATCC CCGGGCCGTT GCTCGACCGC
ATGGAAGTGA TCCGCCTGTC CGGCTACATC ACCGAAGAAA AGCTGGCCAT CGCCAAACGC
CACCTGTGGC CCAAACAGCT GGAAAAGGCT GGCGTTTCCA AGGCCAGCCT CAGCATCAAT
GACAGCGCCC TGCGCCTGGT GATCGACGGC TATGCCCGCG AGGCCGGCGT TCGCCAGTTG
GAGAAGCAAT TGGGCAAGCT GGTGCGCAAG GCCGTGGTCA AGCTGCTGGA AGCCCCCGAA
ACCAAGCTGA AGATTGGCAC CAAGGACCTG GAGGCAGCAC TGGGCAAACC GGTGTTCCGC
AGCGAACAGG TACTGGCTGG CAAAGGCGTG ATCACCGGCC TGGCCTGGAC CAGCATGGGC
GGCGCCACAT TGCCGATCGA AGCGACCCGC ATCCACACCC TCAACCGGGG CTTCAAGCTG
ACCGGCAAGC TGGGGGACGT GATGAAGGAA TCTGCCGAAA TTGCCTACAG CTACGTCAGT
TCCAACCTCA AGCAGTTTGG GGGTGACCCA AGCTTCTTCA ACGAAGCGTT CATCCATTTG
CACGTCCCCG AAGGTGCTAC GCCCAAGGAC GGCCCGAGTG CAGGCATCAC CATGGCCAGT
GCTTTGCTTT CACTAGCCCG CGACCAGTCT CCGAAAAAAG GTGTGGCCAT GACCGGCGAG
CTGACACTTA CCGGCCAGGT GCTGCCAATT GGCGGTGTGC GCGAGAAGGT GATTGCGGCG
CGGCGGCAGA AGATTTTCGA ACTGATTCTT CCGGAGCCTA ACCGCGGCGA CTTCGAAGAA
CTGCCGGACT ACCTGCGTGA AGGCCTGACA GTGCATTTCG CCAAGCGTTT CGCCGACGTG
GCCAAAGTCC TGTTCTGA
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| Protein sequence | MSDQQDFPEH PDEHSEVEHT TQADTSHALA LPGQQLPDKV YVIPIHNRPF FPAQVLPVIV
NEEPWAETLD LVAKSPDHCL ALFFMDTPPE DHRHFDTSAL PQYGTLVKVH HASRENGKLQ
FVAQGLTRVR IRTWLKHHRP PYLVEVEYPR QPTEPTDEVK AYGMALINAI KELLPLNPLY
SEELKNYLNR FSPNDPSPLT DFAAALTSAT GSQLQEVLDC VPMLKRMEKV LPMLRKEVEV
ARLQNEISAE VNRQIGEHQR EFFLKEQLKV IQQELGLTKD DRSADLEQFE QRLEGKTLPA
QARKRIDEEM GKLAILETGS PEYAVTRNYL EWATALPWGV YGKDKLDLKH ARKVLDQYHA
GLDDIKERIL EFLAVGAWKG EISGSIVLLV GPPGVGKTSI GKSIAESLGR PFYRFSVGGM
RDEAEIKGHR RTYIGAQPGK LVQALKDVEV MNPVIMLDEI DKMGQSYQGD PASALLETLD
PEQNVDFLDH YLDLRLDLSK VLFVCTANTL DSIPGPLLDR MEVIRLSGYI TEEKLAIAKR
HLWPKQLEKA GVSKASLSIN DSALRLVIDG YAREAGVRQL EKQLGKLVRK AVVKLLEAPE
TKLKIGTKDL EAALGKPVFR SEQVLAGKGV ITGLAWTSMG GATLPIEATR IHTLNRGFKL
TGKLGDVMKE SAEIAYSYVS SNLKQFGGDP SFFNEAFIHL HVPEGATPKD GPSAGITMAS
ALLSLARDQS PKKGVAMTGE LTLTGQVLPI GGVREKVIAA RRQKIFELIL PEPNRGDFEE
LPDYLREGLT VHFAKRFADV AKVLF
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