| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4361 |
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| Symbol | |
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| ID | 5872168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4883786 |
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| End bp | 4886197 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641549495 |
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| Product | PQQ-dependent dehydrogenase glucose/quinate/shikimate family protein |
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| Protein accession | YP_001670585 |
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| Protein GI | 167035354 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.691425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.131148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTG AAGGTGCCAA CCAAGGAAGC CGCTGGCTAC CGCGCCTGAT TGGCGCGCTG
CTGTTGCTGA TGGGCCTGGC CCTGCTGGCT GGCGGTATCA AGCTGAGCCA GCTGGGCGGA
TCGCTGTACT ACCTGATCGC CGGTATCGGT TTTGCCCTCT CGGGCATCCT GCTGCTGGCC
CAGCGCCGCA TCGCCCTGGG CCTGTATGGC CTGGTGCTGT TGGGCAGCAC CGTGTGGGCC
CTGCTCGAGG TAGGCCTGGA CTGGTGGCAA CTGGTACCGC GCCTGGCTAT CTGGTTCGCC
ATCGGCGTGG TGCTGCTGCT GCCGTGGGCA CGTCGCCCGC TGATCGGCCC AGCCAGCAAA
GCCAATACAG CACTGCTCAG CGTGGCAGTG GTCGCTTCGG GCGCTTGCGC GCTGGGCAGC
CAGTTCACCC ACCCCGGTGA AGTGTTCGGC GAACTGGGCC GCGAAAGCAG CGAAATGGCC
AGCGCCGCCC CGGCGATGCC CGACGGCGAA TGGCAGGCCT ATGGCCGCAC CGAACATGGC
GACCGCTACT CGCCACTGCG CCAGATCACC CCGCAGAACG CCTACCGCCT GGAAGAAGCC
TGGCGTATTC GCACCGGCGA CCTGCCGACC GAAAACGACC CGGTGGAGCT GACCAACCAG
AACACCCCGC TGAAGGTCAA CGGCATGCTC TACGCCTGCA CCGCGCACAG CCGCCTGCTG
GCCCTGGACC CGGACACCGG CGCGGAAATC TGGCGCTACG ACCCACAGGT CAAGAGCCCG
ACCGGCACGT TCAAGGGCTT TGCCCACATG ACCTGCCGTG GTGTTTCGTA CTATGACGAA
AACCGCTACG TCAGTCGCGA CGGCAGCCCA GCGCCGAAAA TTACCGAGGC CGGCCAAGCC
GTGGCCCAGG CCTGCCCGCG CCGCCTGTAC CTGCCTACCG CAGATGCCCG CCTGATCGCC
ATCAACGCCG ACAACGGCAA GGTCTGCGAA GGCTTCGCCA ACCAGGGTGT GATCGATCTC
ACCACCGGCA TCGGGCCGTT CACTGCCGGC GGCTATTACT CCACCTCGCC TGCCGCGGTC
ACCCGTGACC TGGTGATCAT CGGTGGCCAC GTCACCGACA ACGAGTCGAC CAACGAGCCG
TCCGGGGTGA TCCGCGCCTA CGACGTGCAC GATGGCCACC TGGTGTGGAA CTGGGACAGC
AACAACCCGG ACGACACCAA GCCATTGGCT GCCGGCAAAA TGTACAGCCG CAACTCGGCC
AACATGTGGT CAATCGCCAG CGTCGACGAA GACCTTGGCA TGATCTACCT GCCGCTGGGC
AACCAGACCC CGGACCAGTG GGGCGCCAAC CGCACTCCAG GTGCCGAGAA GTACAGCGCC
GGCGTAGTCG CCCTTGACCT GACCACCGGC AAGGCGCGCT GGAACTACCA GTTCACCCAT
CACGACCTGT GGGACATGGA CGTCGGCAGC CAGCCGACCC TGGTGCACCT GAAGACCGAC
GATGGCGTGA AACCGGCGAT CATCGTACCG ACCAAGCAAG GCAGCCTGTA CGTGCTCGAC
CGCCGCGACG GTACGCCGAT CGTGCCGATC CGCGAAATCC CTACCCCACA GGGTGCGGTG
AAAGGCGACC ACACCTCGCC GACTCAAGCC CGCTCCGACC TCAACCTGCT CGGCCCAGAG
CTGACCGAAC AGGCCATGTG GGGCGCTACG CCGTTCGACC AGATGCTGTG CCGCATCCAG
TTCCGCGAAC TGCGCTACGA AGGCCAGTAC ACCCCGCCAT CCGAACAGGG TTCGCTGATT
TATCCGGGCA ACGTGGGTGT ATTCAACTGG GGCAGCGTGT CGGTCGACCC GGTGCGCCAG
TTGCTGTTCA CCTCGCCCAA CTACATGGCA TTCGTGTCGA AGATGGTCCC CCGCGAGCAG
GTAGCCGAAG GCAGCAAGCG CGAAAGCGAG ACCAGCGGCG TGCAGCCCAA TACCGGCGCG
CCGTACGCGG TGACCATGCA CCCGTTCATG TCGCCGCTGG GCGTACCGTG CCAGGCCCCG
GCCTGGGGCT ATGTCGCCGC CATCGACCTG TTCACCAACA AGGTGGTGTG GAAGCACAAG
AACGGCACCA CCCGCGACAG CACCCCGGTA CCGATCGGCC TGCCGGTTGG CGTGCCGAGC
ATGGGCGGTT CGATCGTCAC TGCCGGTGGC GTCGGCTTCC TCAGCGGCAC CCTCGACCAG
TACCTGCGTG CCTATGACGT GAACAACGGC AAGGAACTGT GGAGTGCCCG CCTGCCAGCG
GGTGGCCAGG CCACTCCGAT GAGCTACACC GGCAAGGATG GCAAGCAGTA TGTGCTGGTG
ACCGCCGGCG GCCATGGCTC GCTGGGTACC AAAATGGGCG ATTACATCAT CGCTTACAAA
CTCGCTGAGT AA
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| Protein sequence | MSTEGANQGS RWLPRLIGAL LLLMGLALLA GGIKLSQLGG SLYYLIAGIG FALSGILLLA
QRRIALGLYG LVLLGSTVWA LLEVGLDWWQ LVPRLAIWFA IGVVLLLPWA RRPLIGPASK
ANTALLSVAV VASGACALGS QFTHPGEVFG ELGRESSEMA SAAPAMPDGE WQAYGRTEHG
DRYSPLRQIT PQNAYRLEEA WRIRTGDLPT ENDPVELTNQ NTPLKVNGML YACTAHSRLL
ALDPDTGAEI WRYDPQVKSP TGTFKGFAHM TCRGVSYYDE NRYVSRDGSP APKITEAGQA
VAQACPRRLY LPTADARLIA INADNGKVCE GFANQGVIDL TTGIGPFTAG GYYSTSPAAV
TRDLVIIGGH VTDNESTNEP SGVIRAYDVH DGHLVWNWDS NNPDDTKPLA AGKMYSRNSA
NMWSIASVDE DLGMIYLPLG NQTPDQWGAN RTPGAEKYSA GVVALDLTTG KARWNYQFTH
HDLWDMDVGS QPTLVHLKTD DGVKPAIIVP TKQGSLYVLD RRDGTPIVPI REIPTPQGAV
KGDHTSPTQA RSDLNLLGPE LTEQAMWGAT PFDQMLCRIQ FRELRYEGQY TPPSEQGSLI
YPGNVGVFNW GSVSVDPVRQ LLFTSPNYMA FVSKMVPREQ VAEGSKRESE TSGVQPNTGA
PYAVTMHPFM SPLGVPCQAP AWGYVAAIDL FTNKVVWKHK NGTTRDSTPV PIGLPVGVPS
MGGSIVTAGG VGFLSGTLDQ YLRAYDVNNG KELWSARLPA GGQATPMSYT GKDGKQYVLV
TAGGHGSLGT KMGDYIIAYK LAE
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