| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4354 |
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| Symbol | |
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| ID | 5872161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4874536 |
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| End bp | 4877685 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549488 |
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| Product | membrane carboxypeptidase (penicillin-binding protein) |
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| Protein accession | YP_001670578 |
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| Protein GI | 167035347 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.293217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCAC TGTGGCAATC GGAACCAAGC AGAACGGAAG CACCCGAGAT ACCTCCGGCC
GAGACGCCAC AACCCAAGTC CCCCCGTCAG CGTCGGCTAT GGTGGCGGCT GATCATCCTT
ATCCTGCTGG TGGCACTGGT AGCCATCGGT GTGGCCGCGT ATGACGAATT CCGTACCTCC
GAGCTGCAAT CGCGCGAGTT CAGCAAACTG GCCGGTACGC TGACCTACTC GCTGCAGCCC
GGCCCCAGCG ATGCCATCAT CTACCCAGGT GATGGGCCGT TCGACAAACG CCTTGGCTAT
AGCGCCCTGG GCGAATTCCT GCCGCGCCTG CTCAAGCGCG ACTACCTGAT CAGCGAACAG
GTGAAGTTCT CACCGGCATT GATGAACTAC GTCGATCATG GGCTGTTCGC CCCCTATATC
GAGAAGATCC AGGCCGGCCT GTCGATCACC GACTGCCGCG GCGACACGCT GTACCAGTAC
AACTACCCAC AGCACCTGTA CCCGGATTTT GCAGCGATCC CGCCGGTGAT GGTGAACAGC
CTGCTGTTCA TCGAAAACCG CGACCTGCTG GACACCCAAG ACCCACGTAA CAACCCGGCC
GTGGACTGGC CACGCTTCGC CAAGGCCGCC TACAGCCAGG TGGCCAAGTA CCTGGCCCTG
CCCGGCCAGT CTGCCGGTGG CAGCACCCTG GCCACACAGC TGGAGAAGTA TCGCCACTCA
CCCGATGGCC TGACGGTGTC GGGCGCGGAA AAGATCCGCC AGATGGTTTC TGCCAGCGTG
CGTGCCTACC AGGGCGGCCC TGACACCACC GAGGCACGTC AACGCATCGT GCGCGACTAC
CTCAACAGCG TGCCGCTGTC GGCGGTGCCT GGGCATGGTG AAGTACATGG CATGGCCGAA
GGCCTGCGGG TGTGGTACGG CGCCGACTTC GACCAGGTCA ACCAGGCCCT GAACGCCACC
TCCACCGACC CCGAAAGCAT GGCCGCGCGC GGGTTGGCCC TGCGCCAGGT GCTGTCGCTG
ATGATTGCCC AGCGCCGTCC CTCGCATTAC TTGTCCAAAG GCCGGGTCGA GCTGGCAGAG
CTGACCGACG CGCACATTCG CGTGCTCGCC GCCAACAAAA TCATCGAGCA ACCACTGGCC
GATGCCGCAC TGGCCAGCAA GGCGGTGTAC CGCGACTGGG TAGCGCAACC GACCATCGTG
CCGATCGTTA CCAACAAGGG CATCAGCCTG GCGCGCAACC GCCTGGCAGC CATGCTCAAC
CGCCCGCTGT ACGACCTCGA CCGCCTCGAC GTGTCGGCCA CCAGTACCTT GCAGGCTGAC
CTGCAGTTGC AGGTCAGCCA GTACCTGAAA AACCTTGCCG ACCCAGCGTT TGCCGCGCAG
ATGGGCCTGA TCGGCGAGCG CCTGCTCACC GCCAAGACCA CCGACCAAGT GAGCTACAGC
TTCACCTTGT TCGAGCGCAC CGCCGATGGC TCCCGGGTGC GGGTGCAGAC CGACAGCACC
AACCAGCCCT TCGACATCAA CGAAGGCAGC AAGTTGGAAC TGGGCTCCAC CGCCAAGTTG
CGGGTACTGA CCACCTACCT GGAAATCATC GCCGAGCTGC ACGACAAATA CGCCGGCAAA
CCTGCCGCCG AGTTGAAGAA GGTCGACGTG GCCGAACTCG ACCGCATCAC TCAATGGTCG
CTGGAATGGC TGGCGCAGAA CAGCAAGAAC CAAAGCCTGG ATGCCATGCT CGACGCTGCG
CTTGAGCGCA AATACTCCGC CAACACCGGT GAAGCTTTCT TCACAGGCGG CGGCATGCAC
GTGTTCAACA ACTTCCGCAA GGAAGACAAC AACCGCAACC CGACGCTCAA GGATGCGCTG
CGCGAATCGA TCAACCTGCC GTTCATCCGC CTGATGCGCG ACCTGGTGCG TTACGTGACC
TACCAGCAGC CGTACAACCG TGTGCCGCTG CTCAAGGACG ACGCAGACCC ACGCCGCCAA
GAATACCTGG CCCGCTTCGC CGACAAGGAA GGCACCAACT ACCTGATGCG TTTCTGGAAG
AAGTACCAGC GCAAAACCTC GCAGCAGCGC CTGGACACCT TCCTCGACAG CATGCGCGTG
ACCCCGCAGC GGTTGGCGGC GGTGCACCGC TACCTGTTCC CCGAGGCCGG CCAGGAAACG
TTCAACGCCT TCGTGCGCGC CCACCTGAAG GGTGACAAGA TCGTGCTGGG CAAGCTGACC
GACGGCCGCC TGTCAGAGAT GTACGAGGCT TACGGCCCAG GCAAGTATGA CTTGCCCGAC
CAGGGTTACA TCGCCAAGGT CCACCCGCTG GACTTGTGGC TGCTCGGCTA CCTGCTGAAG
AGCCCAAGCT CGACCTTGAC CGAAATGATC AACGCCAGCC GTTTCGAACG CCAGGAGGTG
TATGGCTGGC TGTTCAAGAG CCGCTACCAG GGCGCCCGTG ACAGCCGTAT CCGCACCATG
GTCGAGATTG AAGCCTTCCT CGATATTCAC CAGCGCTGGA AGCGCGTGGG CTATCCATTC
GACCACCTGG TGCCCTCGCT GGCCACCGCC ATCGGCAGTT CGGGCGACCG CCCCGCCGCG
CTCTCCGAAC TGGTCGGGAT CATCCAGAAC GACGGCATTC GCCTGCCAAC CCTGCGCATA
GACACCCTGC ACTTCGCGGC CAACACACCT TACGAGACCA AGCTGGTCAC CGACCCGGAC
CGGGGCGTGC GGATTCTGCC GGTTGAAGTG GCGCGTGCGC TCAAAGGCGC CATGTCGCAG
GTGGTCGATG CAGGTACCGC GCGGCGTATT TCCGGCAGTT TCAAGCTGCA GGACGGCACG
CCACTGGTGA TGGGCGGCAA GACCGGTACT GGCGACAACC GCATCGAGAG CTTTGGTGCC
GGCGGTCGGC TGATCGGCTC GCGCTCGTTG AACCGTACTG CCACTTTCGT GTTCTTCCTG
GGCGACAACC ACTTCGGCAC ATTGACCGCC TTCGTACCTG GGCGCTCGGC GGAGGCCTTC
AAATTTACCT CGGCACTGCC GGTGCAGGTG CTCAAGGGCA TGGCACCGAT ACTGATGCCG
TACCTGCAGC CGGGCAATCC GAACGAATGC AAGCCACCGC AGGTTGCCAT GCACACGCAA
CCGCCGACAG GGAACATATC GACGAACTAG
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| Protein sequence | MGALWQSEPS RTEAPEIPPA ETPQPKSPRQ RRLWWRLIIL ILLVALVAIG VAAYDEFRTS
ELQSREFSKL AGTLTYSLQP GPSDAIIYPG DGPFDKRLGY SALGEFLPRL LKRDYLISEQ
VKFSPALMNY VDHGLFAPYI EKIQAGLSIT DCRGDTLYQY NYPQHLYPDF AAIPPVMVNS
LLFIENRDLL DTQDPRNNPA VDWPRFAKAA YSQVAKYLAL PGQSAGGSTL ATQLEKYRHS
PDGLTVSGAE KIRQMVSASV RAYQGGPDTT EARQRIVRDY LNSVPLSAVP GHGEVHGMAE
GLRVWYGADF DQVNQALNAT STDPESMAAR GLALRQVLSL MIAQRRPSHY LSKGRVELAE
LTDAHIRVLA ANKIIEQPLA DAALASKAVY RDWVAQPTIV PIVTNKGISL ARNRLAAMLN
RPLYDLDRLD VSATSTLQAD LQLQVSQYLK NLADPAFAAQ MGLIGERLLT AKTTDQVSYS
FTLFERTADG SRVRVQTDST NQPFDINEGS KLELGSTAKL RVLTTYLEII AELHDKYAGK
PAAELKKVDV AELDRITQWS LEWLAQNSKN QSLDAMLDAA LERKYSANTG EAFFTGGGMH
VFNNFRKEDN NRNPTLKDAL RESINLPFIR LMRDLVRYVT YQQPYNRVPL LKDDADPRRQ
EYLARFADKE GTNYLMRFWK KYQRKTSQQR LDTFLDSMRV TPQRLAAVHR YLFPEAGQET
FNAFVRAHLK GDKIVLGKLT DGRLSEMYEA YGPGKYDLPD QGYIAKVHPL DLWLLGYLLK
SPSSTLTEMI NASRFERQEV YGWLFKSRYQ GARDSRIRTM VEIEAFLDIH QRWKRVGYPF
DHLVPSLATA IGSSGDRPAA LSELVGIIQN DGIRLPTLRI DTLHFAANTP YETKLVTDPD
RGVRILPVEV ARALKGAMSQ VVDAGTARRI SGSFKLQDGT PLVMGGKTGT GDNRIESFGA
GGRLIGSRSL NRTATFVFFL GDNHFGTLTA FVPGRSAEAF KFTSALPVQV LKGMAPILMP
YLQPGNPNEC KPPQVAMHTQ PPTGNISTN
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