| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4351 |
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| Symbol | |
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| ID | 5872158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4866616 |
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| End bp | 4870905 |
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| Gene Length | 4290 bp |
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| Protein Length | 1429 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641549485 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001670575 |
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| Protein GI | 167035344 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC CCGCCAAATA CCACCCGGTG CTCGAGCTGT TCCACCCTGC CGTATGCACC
TGGTTTCGTC GCCATTTCGC CACGGTCACC GATGCCCAGG CACAGGCTTG GCCGCTGATT
CATGCGGGCC AATCGACGCT GCTGGCTGCA CCGACCGGCT CGGGCAAGAC GCTAAGTGCC
TTCCTGGCCG TGCTGGACGA ACTGTTCCGC CAAGGCCTGG AGCACCAGGG CGAACTGCCA
GCACAGACCC AAGTCGTCTA CGTATCACCG CTCAAAGCCC TGTCCAATGA CATTCGCCTG
AACCTGCAGG CCCCGCTCGA AGGCATCAGC CAGGCCCTCG CGGAGCAAGG CCTGAACGCG
CCACGCATCA CCACGGCGGT GCGCACCGGC GACACACCGC AGAAGGAACG CGCCGCCATG
CGCAAGCTGG CCCCGCACAT CCTGGTGACC ACCCCCGAAT CGCTTTACGT GTTGATGGGC
TCGGCGTCTG GCCGCGAAGG CCTGGCCAAC GTGCACACGG TAATCGTCGA CGAAATCCAC
GCCCTGGCTG GCAACAAACG CGGCGCCCAC CTGGCACTTA CCCTGGAGCG CCTGCAGGCC
TTGTGCCGCC AGCCACTGCG GCGTATCGGC CTGTCCGCCA CGCAACGCCC GGTAGAACGG
GTGGCGCAGT TTCTGGTCGG TAGCGGGCGC CCCTGCGCCA TTGTCGATGT CGGCCATGCG
CGCAAGCGCG ACCTGGCCAT CGAAGTGCCG CCGGTACCGC TGGGTGCGGT GATGGCCACC
GATGTCTGGG GCCTGGTCTA CGACCGCCTG GCCACCCTTG CCCGTGAACA TCGCACCACA
CTGGTATTCG TCAATACCCG GCGCCTGGCA GAGCGCATCA CCCGCCACCT CAGCGACCGG
TTGGGCAAAG AAGCGGTTGC CGCGCACCAT GGCAGCTTGT CCAAAGAACT GCGCCTGGAT
GCGGAGCAGC GGCTCAAGCG CGGCCAGCTT CAGGTGCTGG TCGCGACCGC ATCGCTGGAG
CTGGGCATTG ATATCGGCGA TGTCGACCTG GTCTGCCAGA TCGCCTCGCC GGGCTCGATT
GCCGCCTTCC TGCAACGGGT TGGCCGCGCC GGCCACCAGG TCGATGGTGT GCCCAAGGGG
CGCTTGTTCC CCACCTCTCG CGATGACTTG ATCGAATGCG TTGCCCTGCT CGACAGCGTG
CGCCAGGGCG AGCTGGACGA ACTGCACATC CCCCGTGCAC CGCTGGATGT GCTGGCCCAG
CAGATCGTCG CCGAAGCCAG CAACCAGGCC TGGCACGAAC AGGCACTGCT GGATTGCCTG
CGTCAGGCCA CGCCTTATGC CGAGCTTGAC CAGGACCACT ATCAAGCCCT GCTACGCATG
CTCGCCGAAG GCTACAACGG CCGCCTGGGA GTACGCAGCG CCTACCTGCA CCGCGATGCG
GTCAGCGGTA CCTTGCGTGG CCGGCGTGGC AGCCAGCTGA CGGCGCTGAC CAGCGGCGGC
ACTATCCCCG ACAACGCCGA CTACACCGTG TTGCTGGAAC CGCAGGCGCT GAACATCGGC
AGCGTCAATG AAGACTTTGC CGTGGAGAGC ATTGCCGGCG ATATCTTTCA GCTGGGCAAT
GCCTCCTACC GCATTCTGCG CGTCGAACCG GGTCGGGTAA GAGTGGAGGA TGCCCATGGC
CTGCCACCTA CCATTCCGTT CTGGCTGGGC GAAGCGCCGG GGCGCAGTGA CGAACTGTCT
GCCGCCGTGG CCCGCCTGCA GGCGCGGATC GACCAGCGAC TGGCACAGGC CGGCAGCGAC
ATGGCCGAGG TACTGACATG GTTGCAGGCT ACCTTCGGAC TGGGCGAGGA CAGCGCCGGG
CAGTTGCTCG ACTACCTGGC CCGCACCCGC GAAGTGCTTG GCGCCCTGCC CTCGCAGGAC
ACCCTGGTAA TGGAGCGTTT TTTCGATGAG TCCGGCGGGA CCCAACTGAT CATCCATTCA
CCATACGGCA GCCGCATCAA CCGCGCCTGG GGCCTGGCCC TGCGCAAGCG CTTTTGCCGC
ACCTTCAACT TCGAGCTGCA GGCAGCCGCC AGCGAAGACG CCATCGTGCT GTCGCTGTCC
ACCAGCCACA GCTTCGAACT GGACGAAGTG TGGCGCTACC TCAATAGCCG CAGCGCCGAG
CCTATCCTCA TCCAGGCCCT GCTGGACGCG CCGCTGTTTG GTGTGCGCTG GCGCTGGAAC
GCGGGTGTCG CCATGGCCCT GCCACGCTTC GTGGGCGGGC GCAAAGTGGC ACCACAGATC
CAGCGAATGA AGAGTGAAGA CCTGGTTGCC GCGGTGTTTC CCGACCAGAT CGCCTGCCTG
GAAAACATCC CCGGCGAGCG GCAGATTCCC GACCACCCGC TGGTCGAGCA AACCCTCGAC
GACTGCCTGC ACGAGGCGAT GGACAGCGAA GGCTGGCTAG CCCTGTTACG GCGCATGGAA
AGCGGCGAAG TGCGCTTGCT ATGCCGCGAC CTGCCCGCCC CTTCGCCCCT CGCTTCAGCC
ATTCTCAACG CGCGGCCGTA TGCTTTTCTG GACGATGCCC CCCTGGAAGA ACGCCGCACC
CAGGCGGTGC TCAACCGGCG CTGGAACGAT GTACACAGTG GCGATGACCT GGGCGCGCTG
GACGCGGATG CCATTGCTGC CGTAGCGGCC GAGGCCTGGC CACAGCCGGG CAATAGCGAT
GAAATGCACG AAGCGTTGAT GAGCCTGGGC GCCATCAGCC AAGCCGAGGT CGCGGCCAAC
CCCAGCTGGG ACCTGCTGCT AAGGCAACTG GCCAAGGCCG GGCGCGCCTT GCGCCTAGCT
GATGACAACC TCTGGCTGGC CCGCGAGCGG CTGAACCTGC TGCTGGCACT GTACCCGGCA
GCACACCTGG AGCCAGCGCT CGAACTGCTC GCTGGCTTTG ATCAGCCCAT CGACCCGGAC
AGTGCACTGA GCGAGCTGCT GCGCGCCCGC CTGAGCGGCC ATGGCCCGCA GACCCAGGCA
CAGATCGCTG CGCCATTGGG CAAATCGGCA ATCGATATCG AGCACGCGTT GGCCCGCCTG
GAAGCTGAAG GCTACGTGCT GCGCGGGTAT TTCAGCCCCG GCGCAACTGA CCTGCAATGG
TGCGAGCGCC ATTTGCTGAC GCGCATCCAC CGCTACACGG TCAAACGCCT GCGTCGCGAG
ATCGAACCGG TCAGCCTGCA GGACTTCATG CGTTTTCTGT TCGACTGGCA GCACCTGGCG
CCTGACGAGC GCCTGCGTGG CCCGCAGGCG GTGGCCCAAG TGCTGGGCCA GTTGCAGGGG
TTCCCCTGCG CCGCCGGCGC CTGGGAGGCG GAGCTGCTGC CAGCGCGCAT CGACGGCTAC
AGCCCGCATT GGCTCGACGA TGCCTGCCGC AGCGGGCAGT TTGCCTGGAG CAGGTTGGCG
GCAACGGTAG CAAGCAGCAC GCTGGCCAGT ACGCCATTGG TACTGCTGCC GCGCGACCAA
CTGAATACCT GGCGCAGTCT GGCGCCCGTG CCTGCAGTCG ATACCCTCGG CCTGCGCGCG
CAACGTGTAC ACGAAACACT CAAAAGCCAG GGTGCGCTGT TCTTCGATGA ACTGGCGCAG
GAGGCACGCC TGCTGCCCAG CGAGCTGGAA ACTGCGCTGC AAGAGTTGGT GGGGTCAGGC
CTGGTCGGTG CGGACAGTTT CACCGGCCTG CGCAGCCTGA TCACGCCTGC GGCCAAGCGC
AGGTCACGCA ACGGCCGCCG TGGACATCCG CCGCTTTCCA GCAGCATGGC GCATGCCGGG
CGTTGGGCAC TGCTGCGCCG CAGCGAGACA CCACCGGATC ACGAACAGCG CCTGGAGCAC
ATTGCCCGCA CCCTGCTGCA CCGCTATGGC GTTATCTGCT GGCGGCTGCT GGAGCGCGAG
AGTGATGTAT TGCCGCCGTG GCGTGAGCTG CTGCGCTGCT ATCACCGGCT GGAGGCGCGG
GGCGAGGTCC GTGGCGGGCG CTTCATTGCC GGGCTGGCTG GTGAACAGTT CGCCCTGCCG
GAGGCGGTGG GGTTGCTGCG GCAGGTCAGG CGACGTGAAC CAGACGCAGC GCTGCAGGTA
ATCAGTGCCG GCGACCCGCT GAACCTTGTC GGCTCGCTAC TGCCCGGAGC GAAAGTGCCA
GCGGTGAGTG GTAACCGCCT GCTGTATCGC GACGGGGTAC CGGTGGCGGT TCAGGTAGCC
GGGCGTTGTT CATTTCTGGT CGACGCACCC GCACAAGAGC AGGACAACTG GCGGCAGAAA
CTGCTGCGCG AAACACGCCC AAAGAGGTAA
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| Protein sequence | MNLPAKYHPV LELFHPAVCT WFRRHFATVT DAQAQAWPLI HAGQSTLLAA PTGSGKTLSA
FLAVLDELFR QGLEHQGELP AQTQVVYVSP LKALSNDIRL NLQAPLEGIS QALAEQGLNA
PRITTAVRTG DTPQKERAAM RKLAPHILVT TPESLYVLMG SASGREGLAN VHTVIVDEIH
ALAGNKRGAH LALTLERLQA LCRQPLRRIG LSATQRPVER VAQFLVGSGR PCAIVDVGHA
RKRDLAIEVP PVPLGAVMAT DVWGLVYDRL ATLAREHRTT LVFVNTRRLA ERITRHLSDR
LGKEAVAAHH GSLSKELRLD AEQRLKRGQL QVLVATASLE LGIDIGDVDL VCQIASPGSI
AAFLQRVGRA GHQVDGVPKG RLFPTSRDDL IECVALLDSV RQGELDELHI PRAPLDVLAQ
QIVAEASNQA WHEQALLDCL RQATPYAELD QDHYQALLRM LAEGYNGRLG VRSAYLHRDA
VSGTLRGRRG SQLTALTSGG TIPDNADYTV LLEPQALNIG SVNEDFAVES IAGDIFQLGN
ASYRILRVEP GRVRVEDAHG LPPTIPFWLG EAPGRSDELS AAVARLQARI DQRLAQAGSD
MAEVLTWLQA TFGLGEDSAG QLLDYLARTR EVLGALPSQD TLVMERFFDE SGGTQLIIHS
PYGSRINRAW GLALRKRFCR TFNFELQAAA SEDAIVLSLS TSHSFELDEV WRYLNSRSAE
PILIQALLDA PLFGVRWRWN AGVAMALPRF VGGRKVAPQI QRMKSEDLVA AVFPDQIACL
ENIPGERQIP DHPLVEQTLD DCLHEAMDSE GWLALLRRME SGEVRLLCRD LPAPSPLASA
ILNARPYAFL DDAPLEERRT QAVLNRRWND VHSGDDLGAL DADAIAAVAA EAWPQPGNSD
EMHEALMSLG AISQAEVAAN PSWDLLLRQL AKAGRALRLA DDNLWLARER LNLLLALYPA
AHLEPALELL AGFDQPIDPD SALSELLRAR LSGHGPQTQA QIAAPLGKSA IDIEHALARL
EAEGYVLRGY FSPGATDLQW CERHLLTRIH RYTVKRLRRE IEPVSLQDFM RFLFDWQHLA
PDERLRGPQA VAQVLGQLQG FPCAAGAWEA ELLPARIDGY SPHWLDDACR SGQFAWSRLA
ATVASSTLAS TPLVLLPRDQ LNTWRSLAPV PAVDTLGLRA QRVHETLKSQ GALFFDELAQ
EARLLPSELE TALQELVGSG LVGADSFTGL RSLITPAAKR RSRNGRRGHP PLSSSMAHAG
RWALLRRSET PPDHEQRLEH IARTLLHRYG VICWRLLERE SDVLPPWREL LRCYHRLEAR
GEVRGGRFIA GLAGEQFALP EAVGLLRQVR RREPDAALQV ISAGDPLNLV GSLLPGAKVP
AVSGNRLLYR DGVPVAVQVA GRCSFLVDAP AQEQDNWRQK LLRETRPKR
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