| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4345 |
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| Symbol | |
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| ID | 5872152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4860335 |
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| End bp | 4862239 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641549479 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001670569 |
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| Protein GI | 167035338 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.970987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGCG ACCCCTCGCT ACTGCTCCCT GCCAAGCCTG CCGTGAATTC CCGCCTGATT
CGTCAATTGC TGTTGCCGCC CCTGATCATC CTGCTGATGG TCGGCCTGGG CCTGGCCGGC
TACCTGATAA GCGAAAACAA CGGCATCCGC ACGCTCAGCG AAAACGGCGA ACGCCAATTG
GAGCTGCACG CGCGCACGGT CGAAAGCGAG ATCAGCAAGT ACACCTACCT GCCGAGCCTG
CTGGAGCTGG AAGACAGTGT CTCGCACCTG CTCACCGACC CGGATGGCGG CTCGCGCCAG
ACGGTCAACG AATACCTTGA GGGCCTGAAC CGGCGCAGCC GCAGCCGGGC CATCTTCGTC
CTCGACACCA ACGGCCGGGT ACAGGCGACC AGCAACTGGC GTGATGCCGA CTCGTTCCTG
GGTGAAGACC TGTCATTCCG CGCCTACTTC CAGACCGCTG TGCGCGGCGA GCCAGGGCGC
TTCTACGGCA TCGGCAGTAC CACTGGCGAA GCCGGCTACT ATCTGGCCCA TGGCCTGGAA
GAACACGGCA AGATCATTGG CGTGGCAGTG ATCAAGGTGC GCCTGGACAC CCTCGAAGAA
CGCTGGCAAC GTGCCCGCCT GGAGGCGTTC GTCAGCGACG AGAACGGCAT CATCATCCTC
TCCAGCGACC CAGCCCGGCG CTTGAAATCG GTGCGCCCGC TGACCCCGCA AATCAAGGAA
CGGCTGGCGC GCAGCCTGCA GTACTACTGG TGGCCGCTGA ACGAGTTGCA GCCACTGGCC
CGGGAAACCC TGGCCGATGG CGTGGAAAAA CTGACCTTCC CGGCCAATAG CGAAACCGCC
CAGGGCAAGC CGCACGAAGT CGCCTACCTG GCACAGACCC GGCGGCTGGC CGACACGCCC
TGGCATTTCA CCCTGCTGAC CCCGCTGCAA GACCTGCGTC GCGAGTCCAT GGTGCAGGGC
ATACTGGTGG GCGTGGCCTT CGCCTTGCTG GCGATCCTCG GCATCGCCTG GAACGAGCGG
CGCAAAGTGA TCGCCACCCG CCTGGCAGCC CGCGAGGCGC TGGAAGAAGC CAACAGCCAA
CTGGAGCGGC GAATTGCCGA ACGCACCGCC GACCTGCGCG CCAGCAACGA ACGCCTGAAA
GGGCAGATTC GCGAGCGCCG GCATGCCGAG CAGACCTTGC GCCACGCCCA GGATGAGCTG
GTGCAGGCAG GCAAACTGGC CGCCATCGGG CAAATGTCCA CCAGCATTGC CCACGAGCTG
AATCAGCCAC TGGCGGCGCT GCGCACCTTG TCTGGCAATA CCGTGCGCTT CCTCGAACGC
GGGGCGCTGG AAACCGCCAG TGCCAACCTG CGCACCATGA ACGACCTGAT CGACCGCATG
GGCCGCATCA CCGCCAGCCT GCGCTCGTTC GCCCGGCGCG GCGACGACAG CGGCCAGGCT
TCACTGGCCA AGGCGGTGGA GGCTACCTTG CAGGTGCTGG CCAACCGCAT CAGCGCCTGC
CACCTGCAAC TGCACCACCA GTTCGAGGAC CAGCAACTGG CCATCGACCA AACTCGCCTG
GAGCAGATTC TGGTCAACCT GATCGGCAAC GCCCTCGATG CCATGGCCGC ACAACCGCTC
CCCGAGCTGT GGCTCGAAGG CGAGCTGCAA GGCGACAAGT ACCGTTTGCA GGTGCGCGAC
AACGGCCACG GTATCGACGC CGAGGCGCGC AAGCACCTGT TCGAACCTTT CTTCACCACC
AAACCGGGCG AACATGGCCT GGGCCTGGGC CTGACCCTGT CGGCGAGCCT TGCCGCCGCC
GCCAAGGGCA GCCTGAACGT CGAGCACCCC GCCACCGGCG GCACGGCCTT CGTCCTGGCC
CTGCCCCTGG TTTCTCCCCC TAGCGAATCG GCAGAGCATC CATGA
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| Protein sequence | MKCDPSLLLP AKPAVNSRLI RQLLLPPLII LLMVGLGLAG YLISENNGIR TLSENGERQL
ELHARTVESE ISKYTYLPSL LELEDSVSHL LTDPDGGSRQ TVNEYLEGLN RRSRSRAIFV
LDTNGRVQAT SNWRDADSFL GEDLSFRAYF QTAVRGEPGR FYGIGSTTGE AGYYLAHGLE
EHGKIIGVAV IKVRLDTLEE RWQRARLEAF VSDENGIIIL SSDPARRLKS VRPLTPQIKE
RLARSLQYYW WPLNELQPLA RETLADGVEK LTFPANSETA QGKPHEVAYL AQTRRLADTP
WHFTLLTPLQ DLRRESMVQG ILVGVAFALL AILGIAWNER RKVIATRLAA REALEEANSQ
LERRIAERTA DLRASNERLK GQIRERRHAE QTLRHAQDEL VQAGKLAAIG QMSTSIAHEL
NQPLAALRTL SGNTVRFLER GALETASANL RTMNDLIDRM GRITASLRSF ARRGDDSGQA
SLAKAVEATL QVLANRISAC HLQLHHQFED QQLAIDQTRL EQILVNLIGN ALDAMAAQPL
PELWLEGELQ GDKYRLQVRD NGHGIDAEAR KHLFEPFFTT KPGEHGLGLG LTLSASLAAA
AKGSLNVEHP ATGGTAFVLA LPLVSPPSES AEHP
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