| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4343 |
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| Symbol | |
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| ID | 5872150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4858863 |
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| End bp | 4859534 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641549477 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001670567 |
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| Protein GI | 167035336 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.460193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATGG ATTTCAGCGA AATCATCCCT GCCCTGCCTG CCCTGTGGGA CGGCATGGTC
ATGACCCTGC AGCTGATGGT CATGGGTGTT GTCGGCGGTA TCGCACTGGG CACCATCCTG
GCACTGATGC GCCTGTCCTC GAGCAAACTG CTGTCACGTC TGGCAGGTGC GTACGTCAAC
TACTTCCGCT CGATCCCGCT GCTGCTGGTG ATCACCTGGT TCTACCTGGC CGTGCCGTTC
GTGCTGCGCT GGATTACCGG CGAAGACACG CCGGTCGGCG CGTTCACCTC CTGCGTGGTC
GCTTTCATGA TGTTCGAGGC CGCGTACTTC TGCGAAATCG TCCGTGCCGG CGTGCAGTCG
ATCTCCAAGG GCCAGATGGG CGCCGCGCAA GCGCTGGGCA TGAACTACGC GCAGACCATG
CGCCTGATCA TCCTGCCCCA GGCGTTCCGC AAGATGACCC CACTGCTGCT GCAGCAGAGC
ATCATCCTGT TCCAGGACAC CTCGCTGGTC TACACCGTGG GCCTGGTGGA CTTCCTCAAC
TCGGCACGTT CCAACGGCGA CATCATCGGG CGCTCACATG AGTTCCTGAT CTTCGCCGGC
GTCGTCTACT TCATCATCAG CTTCTCCGCT TCGTGGCTGG TCAAGCGCCT GCAAAAAAGG
ATCACCGTAT GA
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| Protein sequence | MDMDFSEIIP ALPALWDGMV MTLQLMVMGV VGGIALGTIL ALMRLSSSKL LSRLAGAYVN
YFRSIPLLLV ITWFYLAVPF VLRWITGEDT PVGAFTSCVV AFMMFEAAYF CEIVRAGVQS
ISKGQMGAAQ ALGMNYAQTM RLIILPQAFR KMTPLLLQQS IILFQDTSLV YTVGLVDFLN
SARSNGDIIG RSHEFLIFAG VVYFIISFSA SWLVKRLQKR ITV
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