| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4342 |
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| Symbol | |
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| ID | 5872149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4858116 |
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| End bp | 4858862 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641549476 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001670566 |
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| Protein GI | 167035335 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.695793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTACA ACTGGGACTG GGGCGTGTTC TTCAAGTCCA CCGGCGTGGG CAGCGAAACC
TATCTGGACT GGTACATCAC CGGCCTGGGC TGGACCATCG CCATCGCCAT CACCGCCTGG
ATCATCGCGC TGCTGCTGGG GTCGGTCCTC GGTGTCATGC GTACCGTGCC GAACCGCCTG
GTATCGGGCA TCGCCACCGC CTATGTGGAA CTGTTCCGCA ACGTGCCACT GCTGGTGCAG
CTGTTCATCT GGTACTTCCT GGTACCAGAC TTGCTGCCCG AAGGCTTGCA GGAGTGGTTC
AAGCAGGACC TCAACCCGAC CACCTCGGCA CTGATCAGCG TGGTCATCTG CCTGGGCCTG
TTCACCGCAG CCCGTGTCTG CGAGCAAGTA CGTACCGGTA TTCAGGCGCT ACCCAAAGGC
CAGGAAGCCG CTGCCCGCGC CATGGGCTTC AGCCTCCCGC AGATCTACAA CAACGTGCTG
CTGCCGCAGG CTTACCGCAT CATCATTCCG CCGCTCACCT CCGAGTTTCT CAACGTCTTC
AAGAACTCCT CGGTGGCGTC GCTGATCGGC CTGATGGAAC TGCTGGCGCA GACCAAGCAA
ACCGCCGAAT TCTCCGCCAA CCTGTTCGAG GCGTTCACCT TGGCCACGCT GATCTACTTC
ACCCTGAACA TGGGCCTGAT GCTGCTCATG CGCATGGTCG AGAAAAAAGT CGCCGTGCCC
GGCCTGATCT CCGTGGGGGG CAAGTAA
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| Protein sequence | MNYNWDWGVF FKSTGVGSET YLDWYITGLG WTIAIAITAW IIALLLGSVL GVMRTVPNRL
VSGIATAYVE LFRNVPLLVQ LFIWYFLVPD LLPEGLQEWF KQDLNPTTSA LISVVICLGL
FTAARVCEQV RTGIQALPKG QEAAARAMGF SLPQIYNNVL LPQAYRIIIP PLTSEFLNVF
KNSSVASLIG LMELLAQTKQ TAEFSANLFE AFTLATLIYF TLNMGLMLLM RMVEKKVAVP
GLISVGGK
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