| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4339 |
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| Symbol | glpD |
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| ID | 5872146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4850751 |
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| End bp | 4852277 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549473 |
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| Product | glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001670563 |
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| Protein GI | 167035332 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.50517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCAGC CCGTTTCGTC CCAGCCCCCA CTCGCCGACT GCTATGACCT CGCTGTGATC
GGTGGTGGTA TCAATGGCGT GGGCATCGCT GCCGACGCCG CTGGGCGCGG CCTCAAGGTG
TTCCTCTGCG AAAAGGACGA CCTGGCCCAG CACACCTCGT CGGCCAGCAG CAAGTTGATC
CACGGTGGCC TGCGCTACCT GGAACACTAC GAGTTTCGCC TGGTGCGCGA AGCACTGGCC
GAGCGTGAAG TACTGCTGGC CAAGGCACCG CACATCGTCA AGCCGATGCG CTTCGTGTTG
CCACATCGCC CGCACCTGCG CCCTGCGTGG ATGATTCGTG CTGGCCTGTT CCTGTATGAC
CACCTGGGCA AGCGCAAGCG CCTGGGCGCT TCGCGCAGCC TGCGCTTTGG CCCGGGATAC
CCGCTCAAGC CAGCGATCAG CCGCGGTTTC GAATACGCCG ACTGTGCCGT GGATGACGCC
CGCCTGGTGG TGCTCAATGC CATGGCCGCC CGTGAGCACG GTGCGCACAT CCACACGCGC
ACCCGCTGCC TGCGCGCCGA GCGCGTCGAT GGCCTGTGGC AGGTTGAACT GCAGCACGCC
GACGGCAGCC TGCAGACCCT TCGCGCCCGC GCCCTGGTCA ACGCCGCCGG CCCATGGGTC
GCCAGCTTCA TCAAGGACGA CCTCAAGCTC GATGCGCCTT ATGGCATTCG CCTGATCCAG
GGCAGCCACA TCATCGTTCC GCGCCTGTAC GAGGGCGAAC ATGCCTACAT CCTGCAGAAC
GAAGACCAGC GCATTGTTTT TTGCATCCCC TATCTGGAAC GTTTCACCCT GATCGGCACC
ACCGACCGCG AATACAGTGG CGACCCTGCT CAAGTGAAAA TCACCGAGGG AGAAACGGAT
TACCTGCTCA AGGTGGTGAA CCAGCATTTC AACCATCAGA TCAGCCGTGC CGATATCCTG
CACACTTACT CCGGCGTTCG CCCGCTGTGC AACGACGAAT CGGACAACCC TTCGGCCGTG
ACCCGCGACT ACACCCTTGC GCTGTCCGCA GGCGATGGCC AGGCACCGTT ACTGTCGGTA
TTCGGTGGCA AGCTCACCAC CTATCGCAAG CTGGCAGAAT CGGCAATGGG CGAGCTCAAG
CCATTCTTCA CCGAGATGCG CGGCAGCTGG ACGGCTGAAA GCCCGCTACC GGGCGGCGAG
AACATGACCG ACGCACAGGC GCTGGTCGAT GCGTTGCTGG CACGCCATCA CTGGTTACCC
ATGGACATTG CCAAACGTTG GGCTACCACA TACGGCAGCC GCGCATGGCA ACTGCTGGAC
GGTGTTCAAG GGCCGGTGGA CCTCGGCCAG GCAATCGGCG GTGGCTTGTT CACACGCGAG
GTGGATTACC TGCGCAACGA AGAATGGGCG CTGACGGCCG ACGATATTCT GTGGCGGCGT
ACCAAGCTGG GCCTTTTCAC CACAGCAGCA GAGCAGCAAA CCTTGAAGCA ATACCTGAAC
GATCGCCAGG GCGTCCAGGC TGCCTGA
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| Protein sequence | MSQPVSSQPP LADCYDLAVI GGGINGVGIA ADAAGRGLKV FLCEKDDLAQ HTSSASSKLI
HGGLRYLEHY EFRLVREALA EREVLLAKAP HIVKPMRFVL PHRPHLRPAW MIRAGLFLYD
HLGKRKRLGA SRSLRFGPGY PLKPAISRGF EYADCAVDDA RLVVLNAMAA REHGAHIHTR
TRCLRAERVD GLWQVELQHA DGSLQTLRAR ALVNAAGPWV ASFIKDDLKL DAPYGIRLIQ
GSHIIVPRLY EGEHAYILQN EDQRIVFCIP YLERFTLIGT TDREYSGDPA QVKITEGETD
YLLKVVNQHF NHQISRADIL HTYSGVRPLC NDESDNPSAV TRDYTLALSA GDGQAPLLSV
FGGKLTTYRK LAESAMGELK PFFTEMRGSW TAESPLPGGE NMTDAQALVD ALLARHHWLP
MDIAKRWATT YGSRAWQLLD GVQGPVDLGQ AIGGGLFTRE VDYLRNEEWA LTADDILWRR
TKLGLFTTAA EQQTLKQYLN DRQGVQAA
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