| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4338 |
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| Symbol | |
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| ID | 5872145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4849822 |
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| End bp | 4850577 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641549472 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001670562 |
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| Protein GI | 167035331 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGC CCCCTCGCCA ACAACAAATC CTCGAACTGG TGCGCGATCG CGGTTACGTC
AGTATCGAAG AAATGGCGCA GCTGTTCGTC GTGACACCGC AAACCATTCG CCGTGATATC
AACCAGCTGG CCGAGCTCAA TCTGCTACGT CGCTACCACG GTGGCGCGGC CTACGACTCG
AGCATCGAGA ACACTGCCTA CGCCATGCGT GCCGACCAGA TGCGCGACGA AAAGCAGCGC
ATAGCCGATG CCGTGGCTCG GCAGATTCCC GACCACGCCT CGCTGTTCAT CAACATCGGT
ACCACCACCG AATCGATTGC CCGGGCACTG CTCAACCACA ACCACCTGAA AGTCATCACC
AACAACCTGC ATGTGGCTGC AATTCTGGCC GCCAAGGACG ATTTCGAAGT GCTGGTGGCG
GGTGGCACGG TGCGCCGTGA TGGTGGCGTG GTTGGCCAGG CCAGCGTCGA CTTCATCAAC
CAGTTCAAGG TCGACTTCGC CCTGGTGGGC ATCAGTGGCA TCGACGAAGA TGGCAGCCTA
CTCGATTTCG ACTATCAGGA AGTGCGGGTA TCCCAGGCGA TCATCGCCAA TGCCAGGCAA
GTGATCCTTG CCGCCGACTC CAGCAAGTTC GGGCGCAACG CCATGGTGCG CCTGGGTTCG
ATCAGCCTGG TCGATTGCCT GGTGACCGAC CAGGCGCCAA CCCCCGCCCT CACTCAGTTG
CTCAACCAGT ACAAGATCCG CCTCGAAGTG GTTTGA
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| Protein sequence | MNLPPRQQQI LELVRDRGYV SIEEMAQLFV VTPQTIRRDI NQLAELNLLR RYHGGAAYDS
SIENTAYAMR ADQMRDEKQR IADAVARQIP DHASLFINIG TTTESIARAL LNHNHLKVIT
NNLHVAAILA AKDDFEVLVA GGTVRRDGGV VGQASVDFIN QFKVDFALVG ISGIDEDGSL
LDFDYQEVRV SQAIIANARQ VILAADSSKF GRNAMVRLGS ISLVDCLVTD QAPTPALTQL
LNQYKIRLEV V
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