| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4337 |
|---|
| Symbol | glpK |
|---|
| ID | 5872144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4848221 |
|---|
| End bp | 4849720 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641549471 |
|---|
| Product | glycerol kinase |
|---|
| Protein accession | YP_001670561 |
|---|
| Protein GI | 167035330 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0554] Glycerol kinase |
|---|
| TIGRFAM ID | [TIGR01311] glycerol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA CCCAGGACAA GCACTACATC ATCGCCCTGG ACCAGGGCAC CACCAGTTCG
CGGGCGATTA TCTTCGACCG TGATGCCAAC GTGGTGGGCA CCTCCCAGCG CGAGTTCGCC
CAGCACTACC CGCAGGCGGG CTGGGTCGAG CACGACCCGA TGGAGATCTT CGCCACACAG
AGCGCGACCA TGGTCGAGGC CTTGGCCCAG GCTGGTATCA GCCACGCCCA GGTCGCCGCG
CTGGGCATTA CCAACCAGCG CGAAACCACC GTGGTATGGG ACAAGGAAAC CGGGCGCCCG
GTGTACAACG CCATTGTCTG GCAGTGCCGC CGCAGCACCG AGATCTGTGC CCAGCTCAAG
CGTGACGGCC ATGAAGCGTA CATTCGTGAA ACCACCGGCC TGGTCACCGA CCCGTACTTC
TCCGGTACCA AGCTGAAGTG GATCCTCGAC AATGTCGAAG GCGCCCGTGA ACGCGCCGAG
CGTGGCGAAC TGTTGTTCGG CACCATCGAC ACCTGGCTGA TCTGGAAGTT TTCGGGTGGC
AAGGTGCACG TCACCGACTA CACCAACGCC TCGCGCACGC TGATGTTCAA CATCCACAGC
CTGCAGTGGG ACGACAAACT GCTGGAAATC CTGGGCATCC CGCGGCAGAT GCTGCCCGAG
GTGCGCCCGT CCTCGGAAGT GTACGGCCAC ACCAAGAGCG GCATCGCCAT CGCCGGTATC
GCCGGAGACC AGCAGTCGGC ACTGTTCGGC CAGATGTGCG TGGAGCCAGG CCAGGCCAAG
AATACCTACG GCACCGGCTG CTTCCTGCTG ATGAACACCG GCGACCAGGC GGTGAAGTCG
TCCCATGGCC TGCTCACCAC CATTGCCTGC GGCCCACGCG GTGAAGTGGC CTATGCGCTG
GAAGGCGCGG TATTCAACGG TGGTTCCACC GTGCAATGGC TACGTGACGA ACTGAAGATC
GTCAACGACG CCTTGGATAC CGAGTACTTC GCCAGCAAGG TCAAGGACAG CAACGGCGTC
TACCTGGTGC CAGCCTTCAC CGGCCTGGGT GCCCCGTACT GGGACCCGTA TGCCCGTGGT
GCACTGTTCG GCCTGACTCG CGGCGTGAAG GTGGACCACA TCATCCGCGC CGCGCTGGAA
TCGATCGCCT ACCAGACCCG CGACGTGCTC GACGCCATGC AGCAGGACTG CGGCCAGCAC
CTGTCCGAGC TGCGCGTGGA CGGCGGTGCG GTGGCCAACA ACTTCCTCAT GCAGTTCCAG
GCAGACATCC TCGGCACCTG CGTGGAACGG CCACAGATGC GCGAAACCAC GGCGCTGGGC
GCCGCCTACC TGGCGGGCCT GGCCTGTGGC TTCTGGAGCG GCCTGGACGA GCTGCGCGAC
AAGGCGATCA TCGAGCGCGA GTTCAGCCCG CAGCTGGACG AAACGCAGAA AGAGAAGCTG
TATGCCGGCT GGAAGAAGGC GGTCGAGCGA ACCCGTGACT GGGAAGACCA CGAGGCATAA
|
|---|
| Protein sequence | MTDTQDKHYI IALDQGTTSS RAIIFDRDAN VVGTSQREFA QHYPQAGWVE HDPMEIFATQ
SATMVEALAQ AGISHAQVAA LGITNQRETT VVWDKETGRP VYNAIVWQCR RSTEICAQLK
RDGHEAYIRE TTGLVTDPYF SGTKLKWILD NVEGARERAE RGELLFGTID TWLIWKFSGG
KVHVTDYTNA SRTLMFNIHS LQWDDKLLEI LGIPRQMLPE VRPSSEVYGH TKSGIAIAGI
AGDQQSALFG QMCVEPGQAK NTYGTGCFLL MNTGDQAVKS SHGLLTTIAC GPRGEVAYAL
EGAVFNGGST VQWLRDELKI VNDALDTEYF ASKVKDSNGV YLVPAFTGLG APYWDPYARG
ALFGLTRGVK VDHIIRAALE SIAYQTRDVL DAMQQDCGQH LSELRVDGGA VANNFLMQFQ
ADILGTCVER PQMRETTALG AAYLAGLACG FWSGLDELRD KAIIEREFSP QLDETQKEKL
YAGWKKAVER TRDWEDHEA
|
|---|
| |