| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4336 |
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| Symbol | |
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| ID | 5872143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4847319 |
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| End bp | 4848170 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549470 |
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| Product | MIP family channel protein |
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| Protein accession | YP_001670560 |
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| Protein GI | 167035329 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.277655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTG CTCTACGCCA ACCCACGTTG TCCAGCCAAT GCCTGGCCGA GTTCCTGGGC
ACTGCCCTGC TCATCTTCTT TGGCACCGGC TGCGTCGCCG CGCTCAAGGT CGCGGGCGCC
AGCTTCGGGC TGTGGGAAAT CAGCATCATC TGGGGCGTAG GCGTGAGCAT GGCCATCTAC
TTCAGTGCCG GTATTTCAGG TGCGCACCTG AACCCGGCGG TGAGCATCGC CCTCACCCTG
TTCGCCGGGT TCGACAAGCG CAAGCTGCCC TTCTACATGC TGGCCCAGGT GTGCGGCGCC
TTCTGTGGCG CGGCGCTGGT GTACACGCTG TACAGCAACC TGTTCTTCGA TTTCGAACAA
GCCCACGCCA TGCTGCGCGG CAGTGAAGCC AGCCTGGAGC TGGCCTCGGT GTTCTCCACC
TACCCACACC CGTCCCTGTC CACCGGCCAG GCATTTGCGG TCGAAGTGGT GATCACGGCC
ATTTTGATGG CCGTGATCAT GGCCCTGACC GACGACAACA ACGGCCTGCC GCGCGGAGCC
ATGGCGCCGC TGCTGATCGG CCTGTTGATT GCGGTGATCG GGAGCGCCAT GGGCCCATTG
ACCGGCTTCG CGATGAACCC GGCCCGCGAT TTCGGGCCAA AACTCATGAC CTTCCTGGCC
GGTTGGGGCG AAATCGCCTT CACTGGCGGA CGGGACATTC CGTATTTCCT GGTTCCGGTG
TTCGCACCGA TCCTTGGCGC CTGCCTGGGT GCCGCGACGT ATCGCGGCCT GATTGCCCGC
AACTTGCCAA TGTCGCCTGC CGCGAACCCT GAGACAAATG ACAATCGCCA GGGCGATACT
CAAGTCAATT GA
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| Protein sequence | MTTALRQPTL SSQCLAEFLG TALLIFFGTG CVAALKVAGA SFGLWEISII WGVGVSMAIY
FSAGISGAHL NPAVSIALTL FAGFDKRKLP FYMLAQVCGA FCGAALVYTL YSNLFFDFEQ
AHAMLRGSEA SLELASVFST YPHPSLSTGQ AFAVEVVITA ILMAVIMALT DDNNGLPRGA
MAPLLIGLLI AVIGSAMGPL TGFAMNPARD FGPKLMTFLA GWGEIAFTGG RDIPYFLVPV
FAPILGACLG AATYRGLIAR NLPMSPAANP ETNDNRQGDT QVN
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