Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4333 |
Symbol | |
ID | 5872140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4844483 |
End bp | 4845403 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641549467 |
Product | ornithine carbamoyltransferase |
Protein accession | YP_001670557 |
Protein GI | 167035326 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0078] Ornithine carbamoyltransferase |
TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTA GGCACTTTCT CTCCCTGCTG GACTTCACCA CCGACGAATT GCTCGGGGTG ATCCGCCGCG GCATCGAGCT GAAGGACTTG CGCAAACGAG GCGTGTTGTT CGAGCCGCTG AAGAACCGCG TACTGGGCAT GATCTTCGAG AAGTCCTCCA CCCGCACCCG CGTGTCGTTC GAAGCCGGAA TGATCCAGCT TGGCGGTCAG GCCATCTTCC TGTCCCCGCG CGACACCCAG CTGGGCCGTG GCGAGCCGAT CGGCGACAGT GCCATCGTGC TGTCGAGCAT GCTTGACGTG GTGATGATCC GTACCCACGC CCACAGCACG CTGACCGAGT TCGCTGCCAA ATCGCGCGTG CCGGTGATCA ATGGCCTGTC CGACGAGTCG CACCCGTGCC AGTTGCTGGC CGACATGCAG ACCTTCCTCG AGCACCGCGG CTCGATCCAG GGCAAGACCG TGACCTGGAT CGGCGATGGC TTCAACATGT GCAACTCCTA TATCGAAGCC GCCAGGCAGT TCGATTTCCA GCTGCGCATC GCCTGCCCCG AAGGCTACGA GCCGGATCAA CGCTTCATGG CGCTGGGCGG TGACCGCGTG CAGATCATCC GTGATGTCAA GCAAGCCGTG CGCGATGCAC ACCTTGTGGT CACCGATGTC TGGACTTCCA TGGGTCAGGA GGAGGAAACT GCACGGCGCC TGGCGCATTT CGCGCCTTAC CAGGTCACTC GCGAACTGCT CGACCTGGCG GCACCCGATG TCCTCTTCAT GCACTGCCTA CCCGCCCACC GTGGCGAGGA AATCAGCCAG GACCTGCTCG ACGACCCACG GTCGGTCGCC TGGGACGAGG CTGAAAACCG CCTGCATGCA CAGAAGGCGC TTCTCGAATT CCTTGTAGAA CCGGCTTACC ACCACGCATG A
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Protein sequence | MSARHFLSLL DFTTDELLGV IRRGIELKDL RKRGVLFEPL KNRVLGMIFE KSSTRTRVSF EAGMIQLGGQ AIFLSPRDTQ LGRGEPIGDS AIVLSSMLDV VMIRTHAHST LTEFAAKSRV PVINGLSDES HPCQLLADMQ TFLEHRGSIQ GKTVTWIGDG FNMCNSYIEA ARQFDFQLRI ACPEGYEPDQ RFMALGGDRV QIIRDVKQAV RDAHLVVTDV WTSMGQEEET ARRLAHFAPY QVTRELLDLA APDVLFMHCL PAHRGEEISQ DLLDDPRSVA WDEAENRLHA QKALLEFLVE PAYHHA
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