Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4327 |
Symbol | |
ID | 5872134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4838950 |
End bp | 4839624 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641549461 |
Product | ribonuclease T |
Protein accession | YP_001670551 |
Protein GI | 167035320 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAAG ACCTCTACGA AGACGACCTG GACGCCCAAG GCAGCAGTGG CTCGCGTCAC CCGATGGCCG AGCGCTTCCG TGGCTACTTG CCAGTAGTGG TGGACGTTGA AACGGGTGGT TTCAACAGCG CTACCGACGC TCTGCTGGAA ATTGCCGCCG TCACCATCGG CATGGACGAG AAGGGTTTCC TGTTCCCCGA GCACACCTAT TTCCATCGGG TGGAACCGTT CGAGGGCGCC AATATCGAGG CGGCCGCGCT GGAATTCACC GGCATCAAGC TGGACCACCC ACTGCGCATG GCGGTCAGCG AAGAAAGCGC GCTGACCGAC ATCTTCCGTG GCGTGCGCAA GGCGCTCAAG GCCAATGGCT GCAAACGGGC GATTCTGGTT GGCCACAACA GCAGTTTCGA CCTCGGCTTC CTCAATGCGG CAGTGGCGCG CAATGACCTG AAGCGTAACC CATTCCACCC GTTCTCCAGC TTTGACACCG CCACACTGGC AGGCTTGGCG TATGGCCAGA CGGTACTGGC GCGGGCTTGC CAGAGCGCCG ACATCGACTT CGACGGGCGT GAAGCGCACT CGGCGCGTTA CGACACCGAG AAGACGGCCG AGCTGTTCTG CGGCATCGTC AACCGCTGGA AGGAAATGGG CGGCTGGCGT GATTTCAACG ATTGA
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Protein sequence | MSEDLYEDDL DAQGSSGSRH PMAERFRGYL PVVVDVETGG FNSATDALLE IAAVTIGMDE KGFLFPEHTY FHRVEPFEGA NIEAAALEFT GIKLDHPLRM AVSEESALTD IFRGVRKALK ANGCKRAILV GHNSSFDLGF LNAAVARNDL KRNPFHPFSS FDTATLAGLA YGQTVLARAC QSADIDFDGR EAHSARYDTE KTAELFCGIV NRWKEMGGWR DFND
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