| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4324 |
|---|
| Symbol | |
|---|
| ID | 5872131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4835476 |
|---|
| End bp | 4836693 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641549458 |
|---|
| Product | argininosuccinate synthase |
|---|
| Protein accession | YP_001670548 |
|---|
| Protein GI | 167035317 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0137] Argininosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00032] argininosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGACG TAAAAAAGGT CGTACTGGCG TATTCCGGCG GCCTTGATAC TTCGGTGATT
CTCAAGTGGC TGCAGGATAC CTATAACTGC GAAGTGGTGA CCTTCACCGC TGACCTGGGT
CAGGGCGAAG AGGTCGAGCC GGCCCGTGCC AAGGCCCAGG CAATGGGCGT TAAAGAGATC
TACATCGACG ATCTGCGCGA AGAGTTCGTG CGTGATTTCG TATTCCCGAT GTTCCGCGCC
AACACCGTCT ACGAAGGCGA GTACCTGCTG GGTACTTCCA TCGCCCGTCC GCTGATCGCC
AAGCGCCTGA TCGAAATCGC CAATGCAACC GGTGCTGACG CCATTTCCCA TGGCGCCACC
GGCAAAGGCA ACGACCAGGT ACGTTTCGAG CTGGGTGCCT ATGCGCTGAA GCCAGGCGTC
AAGGTCATCG CTCCATGGCG CGAGTGGGAC CTGCTGTCCC GCGAGAAACT GATGGACTAC
GCCGAAAAGC ACGGCATCCC GATCGAGCGT CACGGCAAGA AGAAGTCGCC GTACTCGATG
GACGCCAACC TGTTGCACAT CTCCTACGAA GGCGGTGTCC TGGAAGATAC CTGGACCGAG
CACGAAGAAG AGATGTGGCG CTGGAGCGTC TCGCCCGAAA ACGCCCCAGA CCAGGCTACC
TACATCGAGC TGACCTACCG CAACGGTGAC ATCGTTGCCA TCAACGGCGT CGAGAAATCC
CCGGCCACCG TGCTGGCCGA CCTGAACCGT ATTGGTGGTG CCAACGGCAT CGGCCGCCTG
GACATCGTCG AAAACCGTTA CGTCGGCATG AAGTCGCGTG GCTGCTACGA AACCCCTGGC
GGCACCATCA TGCTCAAGGC CCACCGTGCC ATCGAGTCGA TCACGCTGGA CCGCGAAGTT
GCTCACCTGA AAGATGAGCT GATGCCGAAA TACGCCAGCC TGATCTACAC CGGCTACTGG
TGGAGCCCGG AGCGTCTGAT GCTGCAGCAG ATGATCGACG CTTCGCAGGT CAACGTGAAT
GGCGTTGTGC GCCTGAAACT GTACAAGGGC AATGTTACCG TGGTTGGCCG CAAGTCGGAC
GATTCGCTGT TCGATGCCAA CATCGCCACC TTCGAAGAAG ATGGCGGCGC CTACAACCAG
GCGGACGCTG CCGGCTTCAT CAAGCTCAAC GCGCTGCGTA TGCGCATTGC TGCCAACAAG
GGCCGTTCGC TGCTCTGA
|
|---|
| Protein sequence | MADVKKVVLA YSGGLDTSVI LKWLQDTYNC EVVTFTADLG QGEEVEPARA KAQAMGVKEI
YIDDLREEFV RDFVFPMFRA NTVYEGEYLL GTSIARPLIA KRLIEIANAT GADAISHGAT
GKGNDQVRFE LGAYALKPGV KVIAPWREWD LLSREKLMDY AEKHGIPIER HGKKKSPYSM
DANLLHISYE GGVLEDTWTE HEEEMWRWSV SPENAPDQAT YIELTYRNGD IVAINGVEKS
PATVLADLNR IGGANGIGRL DIVENRYVGM KSRGCYETPG GTIMLKAHRA IESITLDREV
AHLKDELMPK YASLIYTGYW WSPERLMLQQ MIDASQVNVN GVVRLKLYKG NVTVVGRKSD
DSLFDANIAT FEEDGGAYNQ ADAAGFIKLN ALRMRIAANK GRSLL
|
|---|
| |