| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4306 |
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| Symbol | |
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| ID | 5872113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4818310 |
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| End bp | 4819326 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641549440 |
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| Product | RNA procession exonuclease-like protein |
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| Protein accession | YP_001670530 |
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| Protein GI | 167035299 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTTG TCATCGCCCG CCCCGAAGGC CTGTACTGCC CGCCCGGCGA TTTCTACATC
GACCCTTGGC GGCCCGTGGA CCGAGCCGTG ATCACCCATG GCCACGGTGA CCATGCGCGC
ACCGGTAATG GCCATTATCT GACCGCCAGC CCTGGTGCCG GTATTCTGCG CAGTCGTCTG
GGCCTGGATA TCGATTTGCA GACACTGCCC TACGGCGAAC GCCTGCTGCA CCACGGGGTA
ACCCTGAGCC TGCACCCGGC CGGGCACGTG CTGGGCTCGG CACAGGTGCG CCTGGAGTAT
CAGGGTGAAG TCTGGGTTGC ATCCGGTGAC TACAAGGTAG AGCCCGACGG CACCTGCACC
CCGTTCGAAC CGGTGGCGTG CCACACCTTC ATCACCGAAT CGACCTTCGG TCTGCCGATC
TACCGCTGGC CCAGGCAAAG CGAAATCTTT GCAGGCATCA ATGCCTGGTG GCTGGCCAAT
CGCGAACAGG GCAAGGCCAG CGTGCTGTTC TGCTATGCCT TCGGCAAGGC CCAGCGGATT
CTCCATGGGC TGAATGCCAG CATCGGCCCG ATTCTTGTGC ATGGCGCCAT CGAGCCGCTC
AACCGGGTAT ACCGGGACGC CGGTGTCCAC CTGCCGGAAA CGCGCTATGC AGGCGATATC
CCACGCAACG ACCCACTGCT GCGCCAGGCA CTGGTGCTGG CCCCGCCGTC AGCCAGCGGC
AGCAGCTGGA TGCGCCGTTT CGGCGATTAC AGCGACGCCT TCGCCAGCGG CTGGATGCTG
CTACGCGGTA CCCGCAGGCG GCGCGGCGTG GACCGGGGTT TCGTGCTGTC CGACCACGCC
GACTGGCCCG GCCTGCTCTG GGCCATTGGC CAGACCGGCG CCGAGCGGGT GATGGTCACC
CACGGCTCGG TCAACGTCCT GGTGCGCTAC CTCAACGAAC AAGGCCTGGA TGCCCGCGCC
TTCGTCACCG AGTATGGCGA CGAGGACGAC GTGCCGAACA CCGGGCCTTC GCCATGA
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| Protein sequence | MDLVIARPEG LYCPPGDFYI DPWRPVDRAV ITHGHGDHAR TGNGHYLTAS PGAGILRSRL
GLDIDLQTLP YGERLLHHGV TLSLHPAGHV LGSAQVRLEY QGEVWVASGD YKVEPDGTCT
PFEPVACHTF ITESTFGLPI YRWPRQSEIF AGINAWWLAN REQGKASVLF CYAFGKAQRI
LHGLNASIGP ILVHGAIEPL NRVYRDAGVH LPETRYAGDI PRNDPLLRQA LVLAPPSASG
SSWMRRFGDY SDAFASGWML LRGTRRRRGV DRGFVLSDHA DWPGLLWAIG QTGAERVMVT
HGSVNVLVRY LNEQGLDARA FVTEYGDEDD VPNTGPSP
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