| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4304 |
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| Symbol | |
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| ID | 5872111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4814289 |
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| End bp | 4815629 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641549438 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001670528 |
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| Protein GI | 167035297 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCCA GCAGCCTTCA TCACCTGTTG AAACAACGCC TGGATGCCGG CGAGTGGTTG
CCAGGGCAAC GCATGCCCTC CATCCGCAAG CTGACGGCTG CGGTCGACTT CAGTTACCAC
GACGTCGTAT CGGCCTATGC CCAGCTGGTC AGCGAAGGTG TGTTGACGGC CTCACCCGGC
CGTGGCTACT TCGTCGCAAA CAGGGCCCGG CAAGCGAGCG TTATCCACGA ACCCGAGTGC
ATGGCCGGTG ATCCGCTGTT CCGGCTGCTG CAGGGCGGCC AGCATTACAC CAAGCTGGGC
AGCGGCTGGC TGCCCCCTGC ATGGCGAGAC ACCGAGCTGC TGGCCAAGGC CATTCGGCGC
ACGGCGCGGC TGGAGCAAAG CTCACTGGCA GAGTACGGCG ACATCCAGGG CTACCTGCCC
ATGCGCAAGC AGTTGTGCGT GCACATGAAG CGGCTGACCC GTGTCGAAGC CCGCCCCAAC
CAGTTGCTGA CCACGCTGGG TGCCACGCAA GGCCTGGACC TGGTCGCACG GTTGTTGATC
AAACCAGGCG ACCACGTTTT CGTCGACGAA CCCGGCAACG GCAACCTGAT CAAGCTGATC
CAGCTGGCGG GCGGGCACGT GGTCGGCATT CGGCGAACCC AGGACGGGCC GGACGTGGAA
GAAATGAGAA GCTACCTGGC CACGCACAAG GTCAAGGCGT TCTTTTGCAA CAGCACGTTC
CACAACCCGA CCGGTAGCAA CATCAGCCCC CATAACGCCT TCAGCGTCCT GCGCCTGGCG
GTGGAGCACG AGTTTTTCGT GGTCGAGGAT GATGTGTATG GCGACTTCAG CCCTGCCGTG
CGCCAGACCT TTGCCGAGCT GGACAACCTT GACCGGGTTA TTTACGTCGG TAGCTTCTCC
AAATGCCTGT CGGCATCACT GCGTGTGGGT TTCATTGCCT GCTCGCAAGA CCTGATCGAA
CCACTGACAC GCCTGAAACT GCTGACCTGC GTCGCCGTGC CGGCGTTTTG CGAACGCTTC
GTCAACACCA TATTGTCTGA CGGCACCTAT GCCCGACACA TGAAGGACGT GCAGCAGCGC
CTGATCCGTC AGCAAGTGCA GACCCAACGC TTGTTGCTCG AGCGCGGCTG GCAGTTCGAT
ATTGCGCCGC AAGGCGGCAT GTTCCTCTGG GTCTACCACC CGGACCTGCC AAACCTGCAA
CCTTTCATGC GCAAACTGGA ACAACACAAG ATCTTGTTGA TGCCCGGTTC AGCATTTGCG
GTCAGCCGTG ACTACCAACG CTACGCGCGT ATCAATTGCA CGCATTTTTC CGACACCTTG
GCTGACCACT TCGACGTTTG A
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| Protein sequence | MNPSSLHHLL KQRLDAGEWL PGQRMPSIRK LTAAVDFSYH DVVSAYAQLV SEGVLTASPG
RGYFVANRAR QASVIHEPEC MAGDPLFRLL QGGQHYTKLG SGWLPPAWRD TELLAKAIRR
TARLEQSSLA EYGDIQGYLP MRKQLCVHMK RLTRVEARPN QLLTTLGATQ GLDLVARLLI
KPGDHVFVDE PGNGNLIKLI QLAGGHVVGI RRTQDGPDVE EMRSYLATHK VKAFFCNSTF
HNPTGSNISP HNAFSVLRLA VEHEFFVVED DVYGDFSPAV RQTFAELDNL DRVIYVGSFS
KCLSASLRVG FIACSQDLIE PLTRLKLLTC VAVPAFCERF VNTILSDGTY ARHMKDVQQR
LIRQQVQTQR LLLERGWQFD IAPQGGMFLW VYHPDLPNLQ PFMRKLEQHK ILLMPGSAFA
VSRDYQRYAR INCTHFSDTL ADHFDV
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