| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4301 |
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| Symbol | |
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| ID | 5872108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4811410 |
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| End bp | 4812621 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549435 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001670525 |
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| Protein GI | 167035294 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.108196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCA CGCTACCGCG GCGCACGTAC CTGTATTTCA CCGCACAGTC GATCAACCTG
ACGACTGCTG TCATGTCGGT GACCATGGCC GCCATCGTTG GCGCGGCGCT GGCGCCTGAC
GCTGCGTGGT CCACGGTGCC GTACGGGTTC CAGTTCCTGT GCCTGATGTT GGCAACCTAT
CCGGTCTCCA GGTTGATGGG CCGCATTGGC CGCAAAAAGG CCTTCATGCT GGGGGCGATC
CCCTTGGCGT TGTCGGGTGT AAGCGGCTTC CTGGCGGTGG AGCACCAGCA TTTTCCAACC
CTGGTACTCA GCCATTCTGC GTTGGGTGTG TATATCGCGT TCGCCAACTT CAACCGGTTC
GCGGCCACCG ATAATCTTTC CCAGGCCCTG AAGCCCAAAG CCCTTTCGCT GGTCGTGGCA
GGGGGCGTCA TTGCTGCTGT CGTCGGGCCG ACGCTCACCG AGTGGCTGCG GGATGTGGGC
GGTTACCCAC TGTTTTCGCT GTGTTATGCC GCGTTTGTCG GCCTGGCGTT GCTGTCACTG
CTGATCGCCC TGTGCCTGCC CAACGATGCA GGGGTGGCCC GTGCGGTCAA CAACGCAGCC
AAGTCGTCTA GCGCCCGCAC TGAGCCTGCG AGCCCAAGCG TGATGGTGGC CATGGCGGTT
GCCGCGCTGG GCTACGGGAT CATGAACCTG TTGATGATCC AGGCCTCGAT GCACATGAAG
CACATGCATG AGGACTTCTC TGACGTGCGC CTGGCGATCC AGTGGCATGT GATTGCCATG
TTCGCCCCGT CGTTCTTCAC CGGCGCCATC ATCCAGCGGC TGGGTATCAG GACCACCATT
TGCGCGGGCC TGGCCCTGTT GATCGGCTGT TCGGCGATGA ATATCTGGTC GCACAGCTAC
GCCATGATGA CCCTGGCGCT GATTGCCCTC GGGCTGGGTT GGAACCTGAC GTATGTAGGC
GGCGGTGCCT TGCTCGCCCA GTCGCTGCAA AACAGCCCGG CGGCGATGCA GATGCAGGGC
AAGAACGACC TGGCGATTGC CATTTTCGCC ACCCTCGGCG CATTCAGCCC TTCGCTGTTG
CTGAGTTCGG TCGGTTGGGA CGGCACCAAT GCCATCTGCA TGGTCCTGTG CATCGGGCTG
CTGGTCGCCA CTGCCGGCCT GCTGCAGAAC AAGGCCTGCT TGCATACTTC AATGGAAGGT
AGCCGCAAAT GA
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| Protein sequence | MNSTLPRRTY LYFTAQSINL TTAVMSVTMA AIVGAALAPD AAWSTVPYGF QFLCLMLATY
PVSRLMGRIG RKKAFMLGAI PLALSGVSGF LAVEHQHFPT LVLSHSALGV YIAFANFNRF
AATDNLSQAL KPKALSLVVA GGVIAAVVGP TLTEWLRDVG GYPLFSLCYA AFVGLALLSL
LIALCLPNDA GVARAVNNAA KSSSARTEPA SPSVMVAMAV AALGYGIMNL LMIQASMHMK
HMHEDFSDVR LAIQWHVIAM FAPSFFTGAI IQRLGIRTTI CAGLALLIGC SAMNIWSHSY
AMMTLALIAL GLGWNLTYVG GGALLAQSLQ NSPAAMQMQG KNDLAIAIFA TLGAFSPSLL
LSSVGWDGTN AICMVLCIGL LVATAGLLQN KACLHTSMEG SRK
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